RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 OR10T2Q8NGX3 314 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 SLC7A14Q8TBB6 771 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 CEP63Q96MT8 703 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 TMEM209Q96SK2 561 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 MKNK1Q9BUB5 465 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 ARMCX3Q9UH62 379 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-215ENST00000478531 DPP7Q9UHL4 492 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 PTPRDP23468 1912 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 CCDC195A0A1B0GUA6 201 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 OR6C75A6NL08 312 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 PRRG1O14668 218 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 IKBKBO14920 756 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 MBTPS2O43462 519 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 HCRTO43612 131 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 TBC1D4O60343 1298 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 OAZ2O95190 189 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 HLA-DRAP01903 254 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 C4BPAP04003 597 aaKnown RBP7.4□□□□□ -1.23
BRCA1-215ENST00000478531 CYP11A1P05108 521 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 C8AP07357 584 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 HOXB8P17481 243 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-215ENST00000478531 ACAT1P24752 427 aaKnown RBP7.4□□□□□ -1.23
BRCA1-215ENST00000478531 BRD2P25440 801 aaKnown RBP7.4□□□□□ -1.23
BRCA1-215ENST00000478531 ELF1P32519 619 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 MXI1P50539 228 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 ADCY1Q08828 1119 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 RAB33AQ14088 237 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 SOWAHAQ2M3V2 549 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 ZACNQ401N2 412 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 PPM1LQ5SGD2 360 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 SPOPLQ6IQ16 392 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 RNF19BQ6ZMZ0 732 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 THEM5Q8N1Q8 247 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 SYAP1Q96A49 352 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-215ENST00000478531 BORCS6Q96GS4 357 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 NECAB3Q96P71 396 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-215ENST00000478531 PI4K2AQ9BTU6 479 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 SRRTQ9BXP5 876 aaKnown RBP7.4□□□□□ -1.23
BRCA1-215ENST00000478531 IMPG2Q9BZV3 1241 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 PLEKHA4Q9H4M7 779 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 SMYD3Q9H7B4 428 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 CYP4F11Q9HBI6 524 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 GDAP2Q9NXN4 497 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 DDX43Q9NXZ2 648 aaKnown RBP7.4□□□□□ -1.23
BRCA1-215ENST00000478531 TMEM63CQ9P1W3 806 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 DACH1Q9UI36 760 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 RWDD2AQ9UIY3 292 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 POLIQ9UNA4 740 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 FAM50BQ9Y247 325 aa7.4□□□□□ -1.23
BRCA1-215ENST00000478531 CCL16O15467 120 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 RAP1GAPP47736 663 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 TSPY1Q01534 308 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 ITIH3Q06033 890 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 PUS10Q3MIT2 529 aaKnown RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 HSP90AA4PQ58FG1 418 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 ZNF667Q5HYK9 610 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 LILRA6Q6PI73 481 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 SASS6Q6UVJ0 657 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 OSTM1Q86WC4 334 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 TMEM86AQ8N2M4 240 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 TOP6BLQ8N6T0 577 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 ZNF461Q8TAF7 563 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 TAS1R2Q8TE23 839 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 ADAMTS19Q8TE59 1207 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 SMG7Q92540 1137 aaKnown RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 RTP3Q9BQQ7 232 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 XYLT2Q9H1B5 865 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 S1PR5Q9H228 398 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 ADAM7Q9H2U9 754 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 PIDD1Q9HB75 910 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 TMEM8AQ9HCN3 771 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 DOCK8Q8NF50 2099 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 NOTCH4Q99466 2003 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 STX10O60499 249 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 ABLIM3O94929 683 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 SEC24AO95486 1093 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 FGFR1OPO95684 399 aaKnown RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 BMP1P13497 986 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 ATF2P15336 505 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 ATICP31939 592 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 PSMC1P62191 440 aaKnown RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 NOP14P78316 857 aaKnown RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 MYL7Q01449 175 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 CBX2Q14781 532 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 SMAD2Q15796 467 aaKnown RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 CCDC142Q17RM4 750 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 CBWD6Q4V339 395 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 CBWD3Q5JTY5 395 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 CBWD5Q5RIA9 395 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 TPGS2Q68CL5 300 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 KRT39Q6A163 491 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 C15orf39Q6ZRI6 1047 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 RBM43Q6ZSC3 357 aaKnown RBP7.39□□□□□ -1.23
BRCA1-215ENST00000478531 CCDC149Q6ZUS6 474 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 FRMD5Q7Z6J6 570 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 FILIP1Q7Z7B0 1213 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 TTC9BQ8N6N2 239 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 CCDC150Q8NCX0 1101 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 OR6B3Q8NGW1 331 aa7.39□□□□□ -1.23
BRCA1-215ENST00000478531 KBTBD7Q8WVZ9 684 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms