RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 TRAPPC12Q8WVT3 735 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 EPS15L1Q9UBC2 864 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 XPO7Q9UIA9 1087 aaKnown RBP14.91□□□□□ -0.02
NPHP4-208ENST00000478423 MON2Q7Z3U7 1717 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 CCDC78A2IDD5 438 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 KLRC4O43908 158 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 CHEK2O96017 543 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 RPSAP08865 295 aaKnown RBP14.91□□□□□ -0.02
NPHP4-208ENST00000478423 FAM200BP0CF97 657 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 KCNT1Q5JUK3 1230 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 PARD3BQ8TEW8 1205 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 ELMO3Q96BJ8 720 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 PSMD10O75832 226 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 HMBSP08397 361 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 HSPA9P38646 679 aaKnown RBP14.91□□□□□ -0.02
NPHP4-208ENST00000478423 MAGEA4P43358 317 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 C1orf186Q6ZWK4 172 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 C4orf33Q8N1A6 199 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 TTC8Q8TAM2 541 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 OSMRQ99650 979 aa14.91□□□□□ -0.02
NPHP4-208ENST00000478423 C3orf70A6NLC5 250 aaPredicted RBP14.9□□□□□ -0.02
NPHP4-208ENST00000478423 PDHXO00330 501 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 GYG2O15488 501 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 TTC4O95801 387 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 ZNF286BP0CG31 522 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 CYP2C8P10632 490 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 THPOP40225 353 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 FAM117BQ6P1L5 589 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 USP33Q8TEY7 942 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 RMDN1Q96DB5 314 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 CPB2Q96IY4 423 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 GPBP1L1Q9HC44 474 aaPredicted RBP14.9□□□□□ -0.02
NPHP4-208ENST00000478423 SETD4Q9NVD3 440 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 TISP43B9A030 160 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 OPHN1O60890 802 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 ACO1P21399 889 aaKnown RBP14.9□□□□□ -0.02
NPHP4-208ENST00000478423 SREBF2Q12772 1141 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 FOXP3Q9BZS1 431 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 SARS2Q9NP81 518 aaKnown RBP14.9□□□□□ -0.02
NPHP4-208ENST00000478423 PRDM5Q9NQX1 630 aaPredicted RBP14.9□□□□□ -0.02
NPHP4-208ENST00000478423 PAK5Q9P286 719 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 SLIT3O75094 1523 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 IFT172Q9UG01 1749 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 EEF2KO00418 725 aaKnown RBP14.9□□□□□ -0.02
NPHP4-208ENST00000478423 MAP3K6O95382 1288 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 NCAM1P13591 858 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 FNTAP49354 379 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 ARFIP2P53365 341 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 CENPCQ03188 943 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 VGLL4Q14135 290 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 LRIG3Q6UXM1 1119 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 C3orf62Q6ZUJ4 267 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 TADA2BQ86TJ2 420 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 RNF135Q8IUD6 432 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 DNAJC19Q96DA6 116 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 PABPC5Q96DU9 382 aaKnown RBP14.9□□□□□ -0.02
NPHP4-208ENST00000478423 NPM3O75607 178 aaKnown RBP14.9□□□□□ -0.02
NPHP4-208ENST00000478423 NFKBIAP25963 317 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 TMTC4Q5T4D3 741 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 ELMSAN1Q6PJG2 1045 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 WDR49Q8IV35 697 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 ELMOD1Q8N336 334 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 FAM71DQ8N9W8 422 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 GTSE1Q9NYZ3 720 aa14.9□□□□□ -0.02
NPHP4-208ENST00000478423 TCP11X1B4DZS4 312 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 VDRP11473 427 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 SHROOM1Q2M3G4 852 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-208ENST00000478423 WDR93Q6P2C0 686 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 CD302Q8IX05 232 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 HIPK4Q8NE63 616 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 ZNF512Q96ME7 567 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-208ENST00000478423 LMCD1Q9NZU5 365 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 MED1Q15648 1581 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-208ENST00000478423 STRNO43815 780 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 ADCY3O60266 1144 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 DIAPH2O60879 1101 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 PPATQ06203 517 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 DRP2Q13474 957 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 RNF180Q86T96 592 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 CCDC60Q8IWA6 550 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-208ENST00000478423 REPS2Q8NFH8 660 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 CDCA5Q96FF9 252 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 ZBTB45Q96K62 511 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-208ENST00000478423 PURBQ96QR8 312 aaKnown RBP14.89□□□□□ -0.03
NPHP4-208ENST00000478423 WDR18Q9BV38 432 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 GPRC5DQ9NZD1 345 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 ZFP69BQ9UJL9 534 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 KIAA1257Q9ULG3 409 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 UBA6A0AVT1 1052 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-208ENST00000478423 PIK3CDO00329 1044 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 HAUS5O94927 633 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 FCGRTP55899 365 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 ALKBH8Q96BT7 664 aaKnown RBP14.89□□□□□ -0.03
NPHP4-208ENST00000478423 Q9H521 79 aa14.89□□□□□ -0.03
NPHP4-208ENST00000478423 YY1P25490 414 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 TATDN1Q6P1N9 297 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 CASKIN2Q8WXE0 1202 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 CLMNQ96JQ2 1002 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 GBP5Q96PP8 586 aa14.88□□□□□ -0.03
NPHP4-208ENST00000478423 FUT8Q9BYC5 575 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms