RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.9□□□□□ -1.63
SMARCA1-204ENST00000478420 DKK2Q9UBU2 259 aa4.9□□□□□ -1.63
SMARCA1-204ENST00000478420 PLEKHM1Q9Y4G2 1056 aa4.9□□□□□ -1.63
SMARCA1-204ENST00000478420 PRAMEF33A0A0G2JMD5 474 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 CENPVL1A0A0U1RR11 272 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 A0A1W2PS29 197 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 E7ENX8 843 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 NARSO43776 548 aaKnown RBP4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 PRAMEF10O60809 474 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 VPS4BO75351 444 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 DNAJB5O75953 348 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 SPDEFO95238 335 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 KRT18P05783 430 aaKnown RBP4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 ADH4P08319 380 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 PIM1P11309 404 aaPredicted RBP4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 TACR2P21452 398 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 PEX2P28328 305 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 MCM7P33993 719 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 ANXA11P50995 505 aaKnown RBP4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 ARFIP2P53365 341 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 TBX4P57082 545 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 RPS7P62081 194 aaKnown RBP4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 TAP2Q03519 686 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 FPGSQ05932 587 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 TCF15Q12870 199 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 PTPAQ15257 358 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 PREPLQ4J6C6 727 aaPredicted RBP4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 FAM160B1Q5W0V3 765 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 SLC30A10Q6XR72 485 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 PPP1R32Q7Z5V6 425 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 ARHGEF19Q8IW93 802 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 Q8NA96 180 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 FAM46DQ8NEK8 389 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 ANKS1AQ92625 1134 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 SUCLG2Q96I99 432 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 ADAM2Q99965 735 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 LRRC27Q9C0I9 530 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 DDX21Q9NR30 783 aaKnown RBP eCLIP4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 VSX1Q9NZR4 365 aaPredicted RBP4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 CTTNBP2NLQ9P2B4 639 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 SRRDQ9UH36 339 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 HS3ST4Q9Y661 456 aa4.89□□□□□ -1.63
SMARCA1-204ENST00000478420 ISM1B1AKI9 464 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 MYO1CO00159 1063 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 BTN3A1O00481 513 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 TBC1D4O60343 1298 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 FZD7O75084 574 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 SUN1O94901 812 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 GRPP07492 148 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 C6P13671 934 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 BRAFP15056 766 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 EN2P19622 333 aaPredicted RBP4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 VAV2P52735 878 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 PURAQ00577 322 aaKnown RBP4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 ABHD18Q0P651 414 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 SEMA5AQ13591 1074 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 TP53BP2Q13625 1128 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 DYRK1AQ13627 763 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 GEN1Q17RS7 908 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 LMBRD2Q68DH5 695 aaPredicted RBP4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 USP51Q70EK9 711 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 PSD4Q8NDX1 1056 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 POC1BQ8TC44 478 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 SNX19Q92543 992 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 TMEM125Q96AQ2 219 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 NACC2Q96BF6 587 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 APIPQ96GX9 242 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 LRIG1Q96JA1 1093 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 MLST8Q9BVC4 326 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 SARGQ9BW04 601 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 KIAA1586Q9HCI6 787 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 ETAA1Q9NY74 926 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 ANKFY1Q9P2R3 1169 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 PCDHGB6Q9Y5F9 930 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 RAD54BQ9Y620 910 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 USP19O94966 1318 aa4.88□□□□□ -1.63
SMARCA1-204ENST00000478420 TRGV11A0A075B6L2 103 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 MYO1FO00160 1098 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 TBX3O15119 743 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 SOAT2O75908 522 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 ZFPL1O95159 310 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 MYF5P13349 255 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 TRIM27P14373 513 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 CHRM3P20309 590 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 FDXRP22570 491 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 MC2RQ01718 297 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 RAB32Q13637 225 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 HLXQ14774 488 aaPredicted RBP4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 SAFBQ15424 915 aaKnown RBP eCLIP4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 CD300EQ496F6 205 aaPredicted RBP4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 SLC44A4Q53GD3 710 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 COBLL1Q53SF7 1204 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 IGFL4Q6B9Z1 124 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 SP5Q6BEB4 398 aaPredicted RBP4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 CCSAPQ6IQ19 270 aaPredicted RBP4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 TAF2Q6P1X5 1199 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 KSR2Q6VAB6 950 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 MICALCLQ6ZW33 695 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms