RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 INCA1Q0VD86 236 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 DRAP1Q14919 205 aaPredicted RBP17.3■□□□□ 0.36
VHL-203ENST00000477538 USP41Q3LFD5 358 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 LRIT3Q3SXY7 679 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 OVOS1Q6IE37 1185 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 TAS1R1Q7RTX1 841 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 PPFIBP1Q86W92 1011 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 TTC39CQ8N584 583 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 UBR7Q8N806 425 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 FBXO22Q8NEZ5 403 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 OR6B3Q8NGW1 331 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 SPATA18Q8TC71 538 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 CPLX3Q8WVH0 158 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 ANP32BQ92688 251 aaKnown RBP17.3■□□□□ 0.36
VHL-203ENST00000477538 B3GALT6Q96L58 329 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 SPAG5Q96R06 1193 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 TTPALQ9BTX7 342 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 C11orf84Q9BUA3 381 aaPredicted RBP17.3■□□□□ 0.36
VHL-203ENST00000477538 STK33Q9BYT3 514 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 SNX25Q9H3E2 840 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 STK39Q9UEW8 545 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 PCDHB4Q9Y5E5 795 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 LAMA2P24043 3122 aaKnown RBP17.3■□□□□ 0.36
VHL-203ENST00000477538 A0A1W2PQJ5 194 aa17.29■□□□□ 0.36
VHL-203ENST00000477538 TPM1P09493 284 aa17.29■□□□□ 0.36
VHL-203ENST00000477538 ACO1P21399 889 aaKnown RBP17.29■□□□□ 0.36
VHL-203ENST00000477538 LHX1P48742 406 aa17.29■□□□□ 0.36
VHL-203ENST00000477538 JAM2P57087 298 aa17.29■□□□□ 0.36
VHL-203ENST00000477538 YWHAHQ04917 246 aaPredicted RBP17.29■□□□□ 0.36
VHL-203ENST00000477538 VARS2Q5ST30 1063 aaKnown RBP17.29■□□□□ 0.36
VHL-203ENST00000477538 OSTM1Q86WC4 334 aa17.29■□□□□ 0.36
VHL-203ENST00000477538 VPS52Q8N1B4 723 aa17.29■□□□□ 0.36
VHL-203ENST00000477538 SHC3Q92529 594 aa17.29■□□□□ 0.36
VHL-203ENST00000477538 BAP1Q92560 729 aa17.29■□□□□ 0.36
VHL-203ENST00000477538 GPR88Q9GZN0 384 aa17.29■□□□□ 0.36
VHL-203ENST00000477538 CERS4Q9HA82 394 aa17.29■□□□□ 0.36
VHL-203ENST00000477538 ALG13Q9NP73 1137 aaKnown RBP17.29■□□□□ 0.36
VHL-203ENST00000477538 PUF60Q9UHX1 559 aaKnown RBP17.29■□□□□ 0.36
VHL-203ENST00000477538 BARX2Q9UMQ3 279 aaPredicted RBP17.29■□□□□ 0.36
VHL-203ENST00000477538 CAPN11Q9UMQ6 739 aa17.29■□□□□ 0.36
VHL-203ENST00000477538 LZTS1Q9Y250 596 aa17.29■□□□□ 0.36
VHL-203ENST00000477538 A8MXQ7 604 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 F8VZ95 297 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 GABRDO14764 452 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 CILPO75339 1184 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 KRT5P13647 590 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 CASP14P31944 242 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 GNL1P36915 607 aaPredicted RBP17.28■□□□□ 0.36
VHL-203ENST00000477538 USP8P40818 1118 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 GLUD2P49448 558 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 FXR1P51114 621 aaKnown RBP eCLIP17.28■□□□□ 0.36
VHL-203ENST00000477538 NDST1P52848 882 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 UBE3AQ05086 875 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 TBX2Q13207 712 aaPredicted RBP17.28■□□□□ 0.36
VHL-203ENST00000477538 RTP2Q5QGT7 225 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 KIAA1841Q6NSI8 718 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 TMEM270Q6UE05 265 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 THEM5Q8N1Q8 247 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 SPC24Q8NBT2 197 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 ZNF397Q8NF99 534 aaPredicted RBP17.28■□□□□ 0.36
VHL-203ENST00000477538 SPPL3Q8TCT6 385 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 CHST7Q9NS84 486 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 DDX43Q9NXZ2 648 aaKnown RBP17.28■□□□□ 0.36
VHL-203ENST00000477538 HMGXB4Q9UGU5 601 aa17.28■□□□□ 0.36
VHL-203ENST00000477538 PATJQ8NI35 1801 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 H7C4K7 107 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 RNF225M0QZC1 329 aaPredicted RBP17.27■□□□□ 0.36
VHL-203ENST00000477538 FOXN3O00409 490 aaPredicted RBP17.27■□□□□ 0.36
VHL-203ENST00000477538 HCRTO43612 131 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 OAZ2O95190 189 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 URODP06132 367 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 PNMA6AP0CW24 399 aaPredicted RBP17.27■□□□□ 0.36
VHL-203ENST00000477538 SOX5P35711 763 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 STAT1P42224 750 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 ZBED6P86452 979 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 DSG1Q02413 1049 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 GPM6BQ13491 265 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 MRPL58Q14197 206 aaKnown RBP17.27■□□□□ 0.36
VHL-203ENST00000477538 SMYD5Q6GMV2 418 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 ZNF280DQ6N043 979 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 PDXDC1Q6P996 788 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 ANKS3Q6ZW76 656 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 UNC93AQ86WB7 457 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 RBBP8NLQ8NC74 664 aaPredicted RBP17.27■□□□□ 0.36
VHL-203ENST00000477538 WHAMMQ8TF30 809 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 POF1BQ8WVV4 589 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 ARNTL2Q8WYA1 636 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 RIN2Q8WYP3 895 aaPredicted RBP17.27■□□□□ 0.36
VHL-203ENST00000477538 PIK3R5Q8WYR1 880 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 RTP3Q9BQQ7 232 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 ZBP1Q9H171 429 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 MYO6Q9UM54 1294 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 CNTN6Q9UQ52 1028 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 STXBP5LQ9Y2K9 1186 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 LUC7L2Q9Y383 392 aaKnown RBP17.27■□□□□ 0.36
VHL-203ENST00000477538 NME7Q9Y5B8 376 aa17.27■□□□□ 0.36
VHL-203ENST00000477538 CHD9Q3L8U1 2897 aa17.26■□□□□ 0.35
VHL-203ENST00000477538 ZNF638Q14966 1978 aaKnown RBP17.26■□□□□ 0.35
VHL-203ENST00000477538 GREB1Q4ZG55 1949 aa17.26■□□□□ 0.35
VHL-203ENST00000477538 LRRC53A6NM62 1247 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms