RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 SRRTQ9BXP5 876 aaKnown RBP16.86■□□□□ 0.29
CPSF3-203ENST00000475482 SAMSN1Q9NSI8 373 aaKnown RBP16.86■□□□□ 0.29
CPSF3-203ENST00000475482 CGNQ9P2M7 1197 aaKnown RBP16.86■□□□□ 0.29
CPSF3-203ENST00000475482 FBXL5Q9UKA1 691 aa16.86■□□□□ 0.29
CPSF3-203ENST00000475482 EXOC7Q9UPT5 735 aa16.86■□□□□ 0.29
CPSF3-203ENST00000475482 ANO9A1A5B4 782 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 TRIM49BA6NDI0 452 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 ANHXE9PGG2 379 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 PIRO00625 290 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 GNA14O95837 355 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 LAMP2P13473 410 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 ATF2P15336 505 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 CASP5P51878 434 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 SNRPFP62306 86 aaKnown RBP16.85■□□□□ 0.29
CPSF3-203ENST00000475482 TDGQ13569 410 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 TPGS2Q68CL5 300 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 JADE1Q6IE81 842 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 HS2ST1Q7LGA3 356 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 GRASPQ7Z6J2 395 aaPredicted RBP16.85■□□□□ 0.29
CPSF3-203ENST00000475482 DRC7Q8IY82 874 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 TCEAL8Q8IYN2 117 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 APPL2Q8NEU8 664 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 NXPE3Q969Y0 559 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 HSD3B7Q9H2F3 369 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 AGO2Q9UKV8 859 aaKnown RBP16.85■□□□□ 0.29
CPSF3-203ENST00000475482 MAFFQ9ULX9 164 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 DUSP12Q9UNI6 340 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 TRAF3IP3Q9Y228 551 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 C2CD2Q9Y426 696 aa16.85■□□□□ 0.29
CPSF3-203ENST00000475482 ZFP37Q9Y6Q3 630 aaPredicted RBP16.85■□□□□ 0.29
CPSF3-203ENST00000475482 KCNJ18B7U540 433 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 XYLBO75191 536 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 NFICP08651 508 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 PAX3P23760 479 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 GBP2P32456 591 aaPredicted RBP16.84■□□□□ 0.29
CPSF3-203ENST00000475482 ACOT2P49753 483 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 GUCY2FP51841 1108 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 KCNJ12Q14500 433 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 TCP11X2Q5H9J9 407 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 NELFCDQ8IXH7 590 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 SYCP3Q8IZU3 236 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 BEST2Q8NFU1 509 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 FAM122AQ96E09 287 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 ACCSQ96QU6 501 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 DUSP9Q99956 384 aaKnown RBP16.84■□□□□ 0.29
CPSF3-203ENST00000475482 FGFBP2Q9BYJ0 223 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 KCTD10Q9H3F6 313 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 AVENQ9NQS1 362 aaPredicted RBP16.84■□□□□ 0.29
CPSF3-203ENST00000475482 IFNKQ9P0W0 207 aa16.84■□□□□ 0.29
CPSF3-203ENST00000475482 DNMT3BQ9UBC3 853 aaKnown RBP16.84■□□□□ 0.29
CPSF3-203ENST00000475482 LIMA1Q9UHB6 759 aaKnown RBP16.84■□□□□ 0.29
CPSF3-203ENST00000475482 PPEF2O14830 753 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 CETN3O15182 167 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 CCL16O15467 120 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 PRPF6O94906 941 aaKnown RBP16.83■□□□□ 0.28
CPSF3-203ENST00000475482 PDGFBP01127 241 aaPredicted RBP16.83■□□□□ 0.28
CPSF3-203ENST00000475482 PTMAP06454 111 aaKnown RBP16.83■□□□□ 0.28
CPSF3-203ENST00000475482 ATP1A3P13637 1013 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 TYMPP19971 482 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 FSHRP23945 695 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 TSC2P49815 1807 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 PMS1P54277 932 aaKnown RBP16.83■□□□□ 0.28
CPSF3-203ENST00000475482 LILRA4P59901 499 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 NTHL1P78549 312 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 TMEM132DQ14C87 1099 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 NFIL3Q16649 462 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 CTXN3Q4LDR2 81 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 ZCWPW2Q504Y3 356 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 C9orf57Q5W0N0 161 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 ZNF280DQ6N043 979 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 SUGP1Q8IWZ8 645 aaKnown RBP16.83■□□□□ 0.28
CPSF3-203ENST00000475482 SLC44A3Q8N4M1 653 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 GLIS3Q8NEA6 775 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 TRIM44Q96DX7 344 aaPredicted RBP16.83■□□□□ 0.28
CPSF3-203ENST00000475482 OXCT2Q9BYC2 517 aaPredicted RBP16.83■□□□□ 0.28
CPSF3-203ENST00000475482 CDH7Q9ULB5 785 aa16.83■□□□□ 0.28
CPSF3-203ENST00000475482 LRRC10BA6NIK2 292 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 AP5Z1O43299 807 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 SEC24AO95486 1093 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 GARTP22102 1010 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 AVPR2P30518 371 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 VCPP55072 806 aaKnown RBP16.82■□□□□ 0.28
CPSF3-203ENST00000475482 YWHAHQ04917 246 aaPredicted RBP16.82■□□□□ 0.28
CPSF3-203ENST00000475482 HTR4Q13639 388 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 MYBPC2Q14324 1141 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 IER5LQ5T953 404 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 GET4Q7L5D6 327 aaPredicted RBP16.82■□□□□ 0.28
CPSF3-203ENST00000475482 FILIP1Q7Z7B0 1213 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 NT5DC4Q86YG4 428 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 EFCAB13Q8IY85 973 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 RSAD2Q8WXG1 361 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 POMGNT1Q8WZA1 660 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 XPO4Q9C0E2 1151 aaKnown RBP16.82■□□□□ 0.28
CPSF3-203ENST00000475482 HCFC1R1Q9NWW0 138 aa16.82■□□□□ 0.28
CPSF3-203ENST00000475482 AFF4Q9UHB7 1163 aaKnown RBP16.82■□□□□ 0.28
CPSF3-203ENST00000475482 SPTLC1O15269 473 aa16.81■□□□□ 0.28
CPSF3-203ENST00000475482 VNN2O95498 520 aa16.81■□□□□ 0.28
CPSF3-203ENST00000475482 CYP11A1P05108 521 aa16.81■□□□□ 0.28
CPSF3-203ENST00000475482 PRKCSHP14314 528 aaPredicted RBP16.81■□□□□ 0.28
CPSF3-203ENST00000475482 MTIF2P46199 727 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms