RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 TSPYL2Q9H2G4 693 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-210ENST00000475329 HMGXB4Q9UGU5 601 aa14.62□□□□□ -0.07
TRAF4-210ENST00000475329 GTF3C4Q9UKN8 822 aa14.62□□□□□ -0.07
TRAF4-210ENST00000475329 PCDHGC3Q9UN70 934 aa14.62□□□□□ -0.07
TRAF4-210ENST00000475329 MRFAP1Q9Y605 127 aa14.62□□□□□ -0.07
TRAF4-210ENST00000475329 FAM170AA1A519 330 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 ENC1O14682 589 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 INPPL1O15357 1258 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 NBNO60934 754 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 PARNO95453 639 aaKnown RBP14.61□□□□□ -0.07
TRAF4-210ENST00000475329 EOMESO95936 686 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 CFHP08603 1231 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 VDRP11473 427 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 COL6A1P12109 1028 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 SSTR3P32745 418 aaPredicted RBP14.61□□□□□ -0.07
TRAF4-210ENST00000475329 RPL9P32969 192 aaKnown RBP14.61□□□□□ -0.07
TRAF4-210ENST00000475329 HADHBP55084 474 aaKnown RBP14.61□□□□□ -0.07
TRAF4-210ENST00000475329 AMPD2Q01433 879 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 TRIM60Q495X7 471 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 PLEKHG4Q58EX7 1191 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 C1orf53Q5VUE5 145 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 PAPD7Q5XG87 772 aaKnown RBP14.61□□□□□ -0.07
TRAF4-210ENST00000475329 UNC93AQ86WB7 457 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 PHF13Q86YI8 300 aaPredicted RBP14.61□□□□□ -0.07
TRAF4-210ENST00000475329 MCOLN2Q8IZK6 566 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 SYCE1Q8N0S2 351 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 TMEM35BQ8NCS4 154 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 TET1Q8NFU7 2136 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 LINC01599Q8WXQ3 324 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 CPA5Q8WXQ8 436 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 TFAP2BQ92481 460 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 SEPT8Q92599 483 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 APBB2Q92870 758 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 CYFIP2Q96F07 1278 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 TOX2Q96NM4 488 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 TWNKQ96RR1 684 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 MRPL45Q9BRJ2 306 aaKnown RBP14.61□□□□□ -0.07
TRAF4-210ENST00000475329 ZNF518BQ9C0D4 1074 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 HIPK3Q9H422 1215 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 AVENQ9NQS1 362 aaPredicted RBP14.61□□□□□ -0.07
TRAF4-210ENST00000475329 MIOSQ9NXC5 875 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 CTTNBP2NLQ9P2B4 639 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 CDC23Q9UJX2 597 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 KIAA1257Q9ULG3 409 aa14.61□□□□□ -0.07
TRAF4-210ENST00000475329 CCDC85CA6NKD9 419 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 PODXLO00592 558 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 SPTLC1O15269 473 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 ATMINO43313 823 aaPredicted RBP14.6□□□□□ -0.07
TRAF4-210ENST00000475329 HUS1O60921 280 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 MTA2O94776 668 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 SLU7O95391 586 aaKnown RBP14.6□□□□□ -0.07
TRAF4-210ENST00000475329 CDH5P33151 784 aaPredicted RBP14.6□□□□□ -0.07
TRAF4-210ENST00000475329 GJA8P48165 433 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 LILRA4P59901 499 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 TLE2Q04725 743 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 C1QBPQ07021 282 aaKnown RBP14.6□□□□□ -0.07
TRAF4-210ENST00000475329 ORC1Q13415 861 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 STILQ15468 1287 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 SGO2Q562F6 1265 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 LIN9Q5TKA1 542 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 GLB1LQ6UWU2 654 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 MON1BQ7L1V2 547 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 RTN4RL1Q86UN2 441 aaPredicted RBP14.6□□□□□ -0.07
TRAF4-210ENST00000475329 TOP6BLQ8N6T0 577 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 LRRC57Q8N9N7 239 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 APPL2Q8NEU8 664 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 VCPIP1Q96JH7 1222 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 HEXIM2Q96MH2 286 aaKnown RBP14.6□□□□□ -0.07
TRAF4-210ENST00000475329 UROC1Q96N76 676 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 ZSWIM1Q9BR11 485 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 SNX25Q9H3E2 840 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 UVRAGQ9P2Y5 699 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 CNOT8Q9UFF9 292 aaKnown RBP14.6□□□□□ -0.07
TRAF4-210ENST00000475329 INPP5FQ9Y2H2 1132 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 HYOU1Q9Y4L1 999 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 SAR1BQ9Y6B6 198 aa14.6□□□□□ -0.07
TRAF4-210ENST00000475329 FNDC1Q4ZHG4 1894 aaPredicted RBP14.6□□□□□ -0.07
TRAF4-210ENST00000475329 LTBP2Q14767 1821 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 FTCDO95954 541 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 POMCP01189 267 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 AFF1P51825 1210 aaKnown RBP14.59□□□□□ -0.07
TRAF4-210ENST00000475329 FAM189BP81408 668 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 FAAP100Q0VG06 881 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 TUSC3Q13454 348 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 WHAMMP3Q1A5X7 153 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 SOWAHAQ2M3V2 549 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 DPH6Q7L8W6 267 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 LIMS2Q7Z4I7 341 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 ADGRF2Q8IZF7 708 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 C1orf131Q8NDD1 294 aaKnown RBP14.59□□□□□ -0.07
TRAF4-210ENST00000475329 OR6B3Q8NGW1 331 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 ZNF564Q8TBZ8 553 aaPredicted RBP14.59□□□□□ -0.07
TRAF4-210ENST00000475329 URGCPQ8TCY9 931 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 DIS3LQ8TF46 1054 aaKnown RBP14.59□□□□□ -0.07
TRAF4-210ENST00000475329 DDX27Q96GQ7 796 aaKnown RBP14.59□□□□□ -0.07
TRAF4-210ENST00000475329 C11orf70Q9BRQ4 267 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 NUP85Q9BW27 656 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 LHX5Q9H2C1 402 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 OSGEPQ9NPF4 335 aa14.59□□□□□ -0.07
TRAF4-210ENST00000475329 ADAM22Q9P0K1 906 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms