RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 ACO2Q99798 780 aaKnown RBP13.2□□□□□ -0.3
RNF220-211ENST00000474956 NRBP2Q9NSY0 501 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 CYP1A1P04798 512 aaPredicted RBP13.19□□□□□ -0.3
RNF220-211ENST00000474956 TXNP10599 105 aaKnown RBP13.19□□□□□ -0.3
RNF220-211ENST00000474956 ERO1BQ86YB8 467 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 WNT8AQ9H1J5 351 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 RASGRF2O14827 1237 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 PIGRP01833 764 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 CXCL8P10145 99 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 RARGP13631 454 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 IBSPP21815 317 aaPredicted RBP13.19□□□□□ -0.3
RNF220-211ENST00000474956 COILP38432 576 aaPredicted RBP13.19□□□□□ -0.3
RNF220-211ENST00000474956 SLCO1A2P46721 670 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 TNFAIP8L3Q5GJ75 292 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 CPB2Q96IY4 423 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 RUNDC3BQ96NL0 473 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 ADAM22Q9P0K1 906 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 NXF1Q9UBU9 619 aaKnown RBP13.19□□□□□ -0.3
RNF220-211ENST00000474956 HMGXB4Q9UGU5 601 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 AGTPBP1Q9UPW5 1226 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 SPDYE5A6NIY4 337 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 RWDD2BP57060 319 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 PTP4A2Q12974 167 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 MAMLD1Q13495 774 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 USP37Q86T82 979 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 ZNF606Q8WXB4 792 aa13.19□□□□□ -0.3
RNF220-211ENST00000474956 RIPK2O43353 540 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 VTNP04004 478 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 RALAP11233 206 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 KRT10P13645 584 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 OGDHQ02218 1023 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 CENPCQ03188 943 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 ZNF252P-AS1Q0IIN9 211 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 TCEAL1Q15170 157 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 FAM160B1Q5W0V3 765 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 EFCAB12Q6NXP0 572 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 CCDC62Q6P9F0 684 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 ANKRD13AQ8IZ07 590 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 ABRAQ8N0Z2 381 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 EPS8L3Q8TE67 593 aaKnown RBP13.18□□□□□ -0.3
RNF220-211ENST00000474956 MIEF2Q96C03 454 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 DDX27Q96GQ7 796 aaKnown RBP13.18□□□□□ -0.3
RNF220-211ENST00000474956 HOMER3Q9NSC5 361 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 UVRAGQ9P2Y5 699 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.18□□□□□ -0.3
RNF220-211ENST00000474956 KCTD2Q14681 263 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 TMEM132AQ24JP5 1023 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 MFSD5Q6N075 450 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 TLDC1Q6P9B6 456 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 CCHCR1Q8TD31 782 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 TCP11Q8WWU5 503 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 DDX23Q9BUQ8 820 aaKnown RBP13.18□□□□□ -0.3
RNF220-211ENST00000474956 ROPN1BQ9BZX4 212 aaPredicted RBP13.18□□□□□ -0.3
RNF220-211ENST00000474956 ROPN1Q9HAT0 212 aaPredicted RBP13.18□□□□□ -0.3
RNF220-211ENST00000474956 DNAJC25-GNG10A0A024R161 153 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 A0A1B0GUA9 196 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 KRT19P08727 400 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 HOXC6P09630 235 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 CHKAP35790 457 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 RFC5P40937 340 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 AUHQ13825 339 aaKnown RBP13.18□□□□□ -0.3
RNF220-211ENST00000474956 CRYMQ14894 314 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 CNGA2Q16280 664 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 KAZNQ674X7 775 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 BRSK2Q8IWQ3 736 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 WDTC1Q8N5D0 677 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 GLIS1Q8NBF1 620 aa13.18□□□□□ -0.3
RNF220-211ENST00000474956 ANK1P16157 1881 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 F8VP50 259 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 GPR25O00155 361 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 PIK3R2O00459 728 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 SNX3O60493 162 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 TOM1L1O75674 476 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 NFICP08651 508 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 IFNAR2P48551 515 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 ZNF568Q3ZCX4 644 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 PNMA8AQ86V59 439 aaPredicted RBP13.17□□□□□ -0.3
RNF220-211ENST00000474956 MORC4Q8TE76 937 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 VTI1AQ96AJ9 217 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 HAUS1Q96CS2 278 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 MRPL4Q9BYD3 311 aaKnown RBP13.17□□□□□ -0.3
RNF220-211ENST00000474956 C10orf88Q9H8K7 445 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 CISHQ9NSE2 258 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 MTUS1Q9ULD2 1270 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 ASS1P00966 412 aaKnown RBP13.17□□□□□ -0.3
RNF220-211ENST00000474956 CYP1B1Q16678 543 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 SGO2Q562F6 1265 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 FAM133BQ5BKY9 247 aaKnown RBP13.17□□□□□ -0.3
RNF220-211ENST00000474956 SLFN12LQ6IEE8 588 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 TBC1D1Q86TI0 1168 aaPredicted RBP13.17□□□□□ -0.3
RNF220-211ENST00000474956 ART4Q93070 314 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 TBC1D31Q96DN5 1066 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 TMEM134Q9H6X4 195 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 KIAA1586Q9HCI6 787 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 CYTH4Q9UIA0 394 aa13.17□□□□□ -0.3
RNF220-211ENST00000474956 TLR3O15455 904 aaKnown RBP13.16□□□□□ -0.3
RNF220-211ENST00000474956 ZC3H11AO75152 810 aaKnown RBP eCLIP13.16□□□□□ -0.3
RNF220-211ENST00000474956 GBP2P32456 591 aaPredicted RBP13.16□□□□□ -0.3
RNF220-211ENST00000474956 KRT17Q04695 432 aa13.16□□□□□ -0.3
RNF220-211ENST00000474956 ZNF268Q14587 947 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms