RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TISP43B9A030 160 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 PROB1E7EW31 1015 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 CYB561D2O14569 222 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 LAMTOR5O43504 91 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 FAM189A1O60320 539 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 MICAL2O94851 1124 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 PRPF6O94906 941 aaKnown RBP16.32■□□□□ 0.2
VARS-223ENST00000474643 TFAMQ00059 246 aaKnown RBP16.32■□□□□ 0.2
VARS-223ENST00000474643 GPR17Q13304 367 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 MYBPC2Q14324 1141 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 ARHGAP15Q53QZ3 475 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 FAM78AQ5JUQ0 283 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 FAM26FQ5R3K3 315 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 TANGO2Q6ICL3 276 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 ASCL5Q7RTU5 278 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 ITIH5Q86UX2 942 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 C1orf210Q8IVY1 113 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 SMARCD2Q92925 531 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 HPS3Q969F9 1004 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 FAM213AQ9BRX8 229 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 GPR88Q9GZN0 384 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 GOLPH3LQ9H4A5 285 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 TMEM206Q9H813 350 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 EXOC1Q9NV70 894 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 SLC27A5Q9Y2P5 690 aa16.32■□□□□ 0.2
VARS-223ENST00000474643 DMDP11532 3685 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 PVALEFA0A1B0GWK0 134 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 DPYSL4O14531 572 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 PPEF2O14830 753 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 ZNF202O95125 648 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 FGF19O95750 216 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 LDHAP00338 332 aaKnown RBP16.31■□□□□ 0.2
VARS-223ENST00000474643 GJA1P17302 382 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 CD72P21854 359 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 GDI1P31150 447 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 AARSP49588 968 aaKnown RBP eCLIP16.31■□□□□ 0.2
VARS-223ENST00000474643 CASP5P51878 434 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 TEAD2Q15562 447 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 MGAT5BQ3V5L5 792 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 SLC39A12Q504Y0 691 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 PRSS36Q5K4E3 855 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 CNNM4Q6P4Q7 775 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 NT5DC4Q86YG4 428 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 ZSCAN18Q8TBC5 510 aaPredicted RBP16.31■□□□□ 0.2
VARS-223ENST00000474643 CACTINQ8WUQ7 758 aaKnown RBP16.31■□□□□ 0.2
VARS-223ENST00000474643 DNASE1L2Q92874 299 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 IRF7Q92985 503 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 SAAL1Q96ER3 474 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 ASB16Q96NS5 453 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 NELL2Q99435 816 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 HEBP1Q9NRV9 189 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 CEP72Q9P209 647 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 DOCK6Q96HP0 2047 aa16.31■□□□□ 0.2
VARS-223ENST00000474643 FAM237AA0A1B0GTK4 181 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 A0A1W2PRU2 124 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 MTMR11A4FU01 709 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 ZNF263O14978 683 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 PPP1R37O75864 691 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 MYL1P05976 194 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 PSMC3P17980 439 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 PNPLA4P41247 253 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 CCR2P41597 374 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 MAGEA9P43362 315 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 TUFMP49411 452 aaKnown RBP16.3■□□□□ 0.2
VARS-223ENST00000474643 TSPY1Q01534 308 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 KCNA1Q09470 495 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 KRBA2Q6ZNG9 492 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 CSGALNACT1Q8TDX6 532 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 DEPDC1BQ8WUY9 529 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 FGFBP2Q9BYJ0 223 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 PLA2G2FQ9BZM2 168 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 SLC39A2Q9NP94 309 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 RBAKQ9NYW8 714 aaPredicted RBP16.3■□□□□ 0.2
VARS-223ENST00000474643 NDRG2Q9UN36 371 aaKnown RBP16.3■□□□□ 0.2
VARS-223ENST00000474643 ASB3Q9Y575 518 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 R4GN57 208 aa16.3■□□□□ 0.2
VARS-223ENST00000474643 PIRO00625 290 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 MAN2B1O00754 1011 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 EIF3DO15371 548 aaKnown RBP eCLIP16.29■□□□□ 0.2
VARS-223ENST00000474643 ADRB2P07550 413 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 KRT19P08727 400 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 POU5F1Q01860 360 aaKnown RBP16.29■□□□□ 0.2
VARS-223ENST00000474643 CENPPQ6IPU0 288 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 NELFCDQ8IXH7 590 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 DCP1BQ8IZD4 617 aaKnown RBP16.29■□□□□ 0.2
VARS-223ENST00000474643 ADSSL1Q8N142 457 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 ATAD1Q8NBU5 361 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 E2F7Q96AV8 911 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 GBP4Q96PP9 640 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 STRA6Q9BX79 667 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 OSBPL6Q9BZF3 934 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 IKZF4Q9H2S9 585 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 ATXN3LQ9H3M9 355 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 SEMA4AQ9H3S1 761 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 LTB4R2Q9NPC1 389 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 ABI2Q9NYB9 513 aaPredicted RBP16.29■□□□□ 0.2
VARS-223ENST00000474643 STYXL1Q9Y6J8 313 aa16.29■□□□□ 0.2
VARS-223ENST00000474643 ANO9A1A5B4 782 aa16.28■□□□□ 0.2
VARS-223ENST00000474643 KPNA7A9QM74 516 aa16.28■□□□□ 0.2
VARS-223ENST00000474643 SPTLC1O15269 473 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms