RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 ZBED6P86452 979 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 TAP1Q03518 808 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 PPP2R2DQ66LE6 453 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 PDXDC1Q6P996 788 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 OSTM1Q86WC4 334 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 RNF168Q8IYW5 571 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 TTC39CQ8N584 583 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 KLHL23Q8NBE8 558 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 B3GALT6Q96L58 329 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 SAMD11Q96NU1 681 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 HERC2P3Q9BVR0 1158 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 PLVAPQ9BX97 442 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 SNX25Q9H3E2 840 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 FAM124BQ9H5Z6 455 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 IMPACTQ9P2X3 320 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 MTUS1Q9ULD2 1270 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 LUC7L2Q9Y383 392 aaKnown RBP13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 MYO16Q9Y6X6 1858 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 CHD9Q3L8U1 2897 aa13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 RANBP2P49792 3224 aaKnown RBP13.41□□□□□ -0.26
TRAPPC12-217ENST00000473348 SOD2P04179 222 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 FGFR3P22607 806 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 DNAJB2P25686 324 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 KRT9P35527 623 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 SOX5P35711 763 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 STAT1P42224 750 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 NDST1P52848 882 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 SMAD3P84022 425 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 PLCB3Q01970 1234 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 KRT17Q04695 432 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 YWHAHQ04917 246 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 GOLGA8FQ08AF8 430 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 GOLGA8DPQ0D2H9 430 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 VARS2Q5ST30 1063 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 OVOS1Q6IE37 1185 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 TMEM270Q6UE05 265 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 TAS1R1Q7RTX1 841 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 DDX53Q86TM3 631 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 CEP57Q86XR8 500 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 GPIHBP1Q8IV16 184 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 CNGA4Q8IV77 575 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 RBBP8NLQ8NC74 664 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 ZNF397Q8NF99 534 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 OR6B3Q8NGW1 331 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 SPATA18Q8TC71 538 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 TGS1Q96RS0 853 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 DDX43Q9NXZ2 648 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 HMGXB4Q9UGU5 601 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 MYO6Q9UM54 1294 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 BARX2Q9UMQ3 279 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 NME7Q9Y5B8 376 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 GREB1Q4ZG55 1949 aa13.4□□□□□ -0.26
TRAPPC12-217ENST00000473348 ZNF638Q14966 1978 aaKnown RBP13.4□□□□□ -0.27
TRAPPC12-217ENST00000473348 LAMA2P24043 3122 aaKnown RBP13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 A0A1W2PPC1 479 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 A8MXQ7 604 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 AKR1B15C9JRZ8 316 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 C5orf67F2Z3F1 127 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 FOXN3O00409 490 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 GABRDO14764 452 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 HCRTO43612 131 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 CILPO75339 1184 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 GFPT2O94808 682 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 RB1P06400 928 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 FAM163BP0C2L3 166 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 ACAT1P24752 427 aaKnown RBP13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 GNL1P36915 607 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 LHX1P48742 406 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 GLUD2P49448 558 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 ADKP55263 362 aaKnown RBP13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 ERVK-21P61565 698 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 ORC1Q13415 861 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 USP41Q3LFD5 358 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 ZNF394Q53GI3 561 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 RTP2Q5QGT7 225 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 SFMBT2Q5VUG0 894 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 E4F1Q66K89 784 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 UNC93AQ86WB7 457 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 WHAMMQ8TF30 809 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 TIFAQ96CG3 184 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 PDLIM2Q96JY6 352 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 TWNKQ96RR1 684 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 TTPALQ9BTX7 342 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 C11orf84Q9BUA3 381 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 ELOVL4Q9GZR5 314 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 NUCKS1Q9H1E3 243 aaKnown RBP13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 SLC28A3Q9HAS3 691 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 ABHD10Q9NUJ1 306 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 CNTN6Q9UQ52 1028 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 STXBP5LQ9Y2K9 1186 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 MYO7AQ13402 2215 aa13.39□□□□□ -0.27
TRAPPC12-217ENST00000473348 CYP26A1O43174 497 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 URODP06132 367 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 PDGFRBP09619 1106 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 FERP16591 822 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 LMO2P25791 158 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 ZNF132P52740 706 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 RAD23BP54727 409 aa13.38□□□□□ -0.27
TRAPPC12-217ENST00000473348 ARID5AQ03989 594 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms