RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 WSCD1Q658N2 575 aa22.39■■□□□ 1.17
EPHB3-202ENST00000473079 SPRYD3Q8NCJ5 442 aa22.39■■□□□ 1.17
EPHB3-202ENST00000473079 C2orf15Q8WU43 125 aaKnown RBP22.39■■□□□ 1.17
EPHB3-202ENST00000473079 ASB16Q96NS5 453 aa22.39■■□□□ 1.17
EPHB3-202ENST00000473079 DDX23Q9BUQ8 820 aaKnown RBP22.39■■□□□ 1.17
EPHB3-202ENST00000473079 PLA2G2FQ9BZM2 168 aa22.39■■□□□ 1.17
EPHB3-202ENST00000473079 DNAJC25Q9H1X3 360 aa22.39■■□□□ 1.17
EPHB3-202ENST00000473079 TRPV4Q9HBA0 871 aa22.39■■□□□ 1.17
EPHB3-202ENST00000473079 ITGA11Q9UKX5 1188 aa22.39■■□□□ 1.17
EPHB3-202ENST00000473079 SLC27A5Q9Y2P5 690 aa22.39■■□□□ 1.17
EPHB3-202ENST00000473079 SIT1Q9Y3P8 196 aa22.39■■□□□ 1.17
EPHB3-202ENST00000473079 PVALEFA0A1B0GWK0 134 aa22.38■■□□□ 1.17
EPHB3-202ENST00000473079 ZNF233A6NK53 670 aa22.38■■□□□ 1.17
EPHB3-202ENST00000473079 NRG2O14511 850 aaPredicted RBP22.38■■□□□ 1.17
EPHB3-202ENST00000473079 ITGB3P05106 788 aa22.38■■□□□ 1.17
EPHB3-202ENST00000473079 MYL4P12829 197 aa22.38■■□□□ 1.17
EPHB3-202ENST00000473079 RFX1P22670 979 aa22.38■■□□□ 1.17
EPHB3-202ENST00000473079 SURF1Q15526 300 aa22.38■■□□□ 1.17
EPHB3-202ENST00000473079 SLC44A4Q53GD3 710 aa22.38■■□□□ 1.17
EPHB3-202ENST00000473079 TMC8Q8IU68 726 aa22.38■■□□□ 1.17
EPHB3-202ENST00000473079 SMARCD2Q92925 531 aa22.38■■□□□ 1.17
EPHB3-202ENST00000473079 ZFP14Q9HCL3 533 aa22.38■■□□□ 1.17
EPHB3-202ENST00000473079 PDE11AQ9HCR9 933 aa22.38■■□□□ 1.17
EPHB3-202ENST00000473079 GDAP2Q9NXN4 497 aa22.38■■□□□ 1.17
EPHB3-202ENST00000473079 AGAP1Q9UPQ3 857 aa22.38■■□□□ 1.17
EPHB3-202ENST00000473079 UBE4BO95155 1302 aa22.37■■□□□ 1.17
EPHB3-202ENST00000473079 PROB1E7EW31 1015 aa22.37■■□□□ 1.17
EPHB3-202ENST00000473079 POLR2BP30876 1174 aaKnown RBP22.37■■□□□ 1.17
EPHB3-202ENST00000473079 RBP5P82980 135 aa22.37■■□□□ 1.17
EPHB3-202ENST00000473079 SLC39A12Q504Y0 691 aa22.37■■□□□ 1.17
EPHB3-202ENST00000473079 DNAJB7Q7Z6W7 309 aaPredicted RBP22.37■■□□□ 1.17
EPHB3-202ENST00000473079 CSGALNACT2Q8N6G5 542 aa22.37■■□□□ 1.17
EPHB3-202ENST00000473079 PSMG2Q969U7 264 aa22.37■■□□□ 1.17
EPHB3-202ENST00000473079 ZSWIM3Q96MP5 696 aa22.37■■□□□ 1.17
EPHB3-202ENST00000473079 DLGAP2Q9P1A6 1054 aa22.37■■□□□ 1.17
EPHB3-202ENST00000473079 KANSL1LA0AUZ9 987 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 TGFB1I1O43294 461 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 FGF19O95750 216 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 NBL1P41271 181 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 SNW1Q13573 536 aaKnown RBP22.36■■□□□ 1.17
EPHB3-202ENST00000473079 MLF2Q15773 248 aaPredicted RBP22.36■■□□□ 1.17
EPHB3-202ENST00000473079 ITIH5Q86UX2 942 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 LRRTM3Q86VH5 581 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 DCP1BQ8IZD4 617 aaKnown RBP22.36■■□□□ 1.17
EPHB3-202ENST00000473079 TTC9BQ8N6N2 239 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 SHKBP1Q8TBC3 707 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 SPATA18Q8TC71 538 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 SPPL2BQ8TCT7 592 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 SCFD1Q8WVM8 642 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 DNASE1L2Q92874 299 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 OSBPL6Q9BZF3 934 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 FAM86C1Q9NVL1 165 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 INTS13Q9NVM9 706 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 HSPBP1Q9NZL4 362 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 SCN1AP35498 2009 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 TSC2P49815 1807 aa22.36■■□□□ 1.17
EPHB3-202ENST00000473079 HUS1O60921 280 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 TMEM191BP0C7N4 346 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 SLFN14P0C7P3 912 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 TEAD2Q15562 447 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 BMT2Q1RMZ1 405 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 CBWD2Q8IUF1 395 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 TMEM86AQ8N2M4 240 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 PDCL2Q8N4E4 241 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 PJA1Q8NG27 643 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 E2F7Q96AV8 911 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 ANKRD36BP1Q96IX9 119 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 TRPV5Q9NQA5 729 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 AGPAT3Q9NRZ7 376 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 CGNQ9P2M7 1197 aaKnown RBP22.35■■□□□ 1.17
EPHB3-202ENST00000473079 SIX4Q9UIU6 781 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 L1RE1Q9UN81 338 aa22.35■■□□□ 1.17
EPHB3-202ENST00000473079 GJA1P17302 382 aa22.34■■□□□ 1.17
EPHB3-202ENST00000473079 ANGPT1Q15389 498 aa22.34■■□□□ 1.17
EPHB3-202ENST00000473079 DUOXA2Q1HG44 320 aa22.34■■□□□ 1.17
EPHB3-202ENST00000473079 CEP57L1Q8IYX8 460 aa22.34■■□□□ 1.17
EPHB3-202ENST00000473079 ZSCAN18Q8TBC5 510 aaPredicted RBP22.34■■□□□ 1.17
EPHB3-202ENST00000473079 NOC3LQ8WTT2 800 aaKnown RBP22.34■■□□□ 1.17
EPHB3-202ENST00000473079 ACBD6Q9BR61 282 aa22.34■■□□□ 1.17
EPHB3-202ENST00000473079 TRMT61BQ9BVS5 477 aaKnown RBP22.34■■□□□ 1.17
EPHB3-202ENST00000473079 MTMR12Q9C0I1 747 aa22.34■■□□□ 1.17
EPHB3-202ENST00000473079 BLZF1Q9H2G9 400 aa22.34■■□□□ 1.17
EPHB3-202ENST00000473079 ZDHHC9Q9Y397 364 aa22.34■■□□□ 1.17
EPHB3-202ENST00000473079 CACNA1HO95180 2353 aa22.34■■□□□ 1.17
EPHB3-202ENST00000473079 A0A1W2PRU2 124 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 HAPLN1P10915 354 aaPredicted RBP22.33■■□□□ 1.17
EPHB3-202ENST00000473079 PSMC3P17980 439 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 CMA1P23946 247 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 CASP1P29466 404 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 AFMP43652 599 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 TSPY1Q01534 308 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 CUL4BQ13620 913 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 NFE2Q16621 373 aaPredicted RBP22.33■■□□□ 1.17
EPHB3-202ENST00000473079 SCARA3Q6AZY7 606 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 GAREM2Q75VX8 874 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 DPH6Q7L8W6 267 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 HS2ST1Q7LGA3 356 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 LIMS2Q7Z4I7 341 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 WDR49Q8IV35 697 aa22.33■■□□□ 1.17
EPHB3-202ENST00000473079 MFSD6LQ8IWD5 586 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms