RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 LPOP22079 712 aaPredicted RBP6.16□□□□□ -1.42
CD46-213ENST00000471987 ABCG1P45844 678 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 NDUFV1P49821 464 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 FXR1P51114 621 aaKnown RBP eCLIP6.16□□□□□ -1.42
CD46-213ENST00000471987 PSMC1P62191 440 aaKnown RBP6.16□□□□□ -1.42
CD46-213ENST00000471987 PTPN21Q16825 1174 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 KIAA1614Q5VZ46 1190 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 SLC30A10Q6XR72 485 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 MIER2Q8N344 545 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 C3orf20Q8ND61 904 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 CNPPD1Q9BV87 410 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 ST3GAL5Q9UNP4 418 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 ADGRA2Q96PE1 1338 aa6.16□□□□□ -1.42
CD46-213ENST00000471987 DNAJC9-AS1A6NH13 148 aa6.15□□□□□ -1.42
CD46-213ENST00000471987 CGB1A6NKQ9 187 aa6.15□□□□□ -1.42
CD46-213ENST00000471987 VWC2LB2RUY7 222 aa6.15□□□□□ -1.42
CD46-213ENST00000471987 ITPKBP27987 946 aa6.15□□□□□ -1.42
CD46-213ENST00000471987 FAM50AQ14320 339 aaKnown RBP6.15□□□□□ -1.42
CD46-213ENST00000471987 HABP2Q14520 560 aaPredicted RBP6.15□□□□□ -1.42
CD46-213ENST00000471987 THEMIS2Q5TEJ8 643 aa6.15□□□□□ -1.42
CD46-213ENST00000471987 FCRLBQ6BAA4 426 aa6.15□□□□□ -1.42
CD46-213ENST00000471987 AMIGO2Q86SJ2 522 aa6.15□□□□□ -1.42
CD46-213ENST00000471987 PRPF38AQ8NAV1 312 aaKnown RBP6.15□□□□□ -1.42
CD46-213ENST00000471987 FBXO41Q8TF61 875 aa6.15□□□□□ -1.42
CD46-213ENST00000471987 TPSD1Q9BZJ3 242 aa6.15□□□□□ -1.42
CD46-213ENST00000471987 GPR35Q9HC97 309 aa6.15□□□□□ -1.42
CD46-213ENST00000471987 ETAA1Q9NY74 926 aa6.15□□□□□ -1.42
CD46-213ENST00000471987 SBNO2Q9Y2G9 1366 aa6.15□□□□□ -1.43
CD46-213ENST00000471987 WIPF3A6NGB9 483 aa6.14□□□□□ -1.43
CD46-213ENST00000471987 PRKCGP05129 697 aa6.14□□□□□ -1.43
CD46-213ENST00000471987 CCND1P24385 295 aa6.14□□□□□ -1.43
CD46-213ENST00000471987 PIK3CGP48736 1102 aa6.14□□□□□ -1.43
CD46-213ENST00000471987 ZNF135P52742 658 aaPredicted RBP6.14□□□□□ -1.43
CD46-213ENST00000471987 EXOSC10Q01780 885 aaKnown RBP6.14□□□□□ -1.43
CD46-213ENST00000471987 ODF1Q14990 250 aa6.14□□□□□ -1.43
CD46-213ENST00000471987 PAPD7Q5XG87 772 aaKnown RBP6.14□□□□□ -1.43
CD46-213ENST00000471987 RASAL3Q86YV0 1011 aa6.14□□□□□ -1.43
CD46-213ENST00000471987 PSD4Q8NDX1 1056 aa6.14□□□□□ -1.43
CD46-213ENST00000471987 MANSC4A6NHS7 340 aaPredicted RBP6.13□□□□□ -1.43
CD46-213ENST00000471987 SLC16A6O15403 523 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 DTNBO60941 627 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 RHOP08100 348 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 RARBP10826 455 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 ITGALP20701 1170 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 PRDX5P30044 214 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 KRTAP10-11P60412 298 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 KIF22Q14807 665 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 PLAC9Q5JTB6 97 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 SMG7Q92540 1137 aaKnown RBP6.13□□□□□ -1.43
CD46-213ENST00000471987 RFKQ969G6 155 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 FKBP10Q96AY3 582 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 ACTRT3Q9BYD9 372 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 SLC29A3Q9BZD2 475 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 AMBRA1Q9C0C7 1298 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 WDCPQ9H6R7 721 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 SLAMF7Q9NQ25 335 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 EHD3Q9NZN3 535 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 ADAM21Q9UKJ8 722 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.13□□□□□ -1.43
CD46-213ENST00000471987 SPEF1Q9Y4P9 236 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 TNKSO95271 1327 aa6.13□□□□□ -1.43
CD46-213ENST00000471987 LRRC14BA6NHZ5 514 aa6.12□□□□□ -1.43
CD46-213ENST00000471987 PRSS29PA6NIE9 313 aa6.12□□□□□ -1.43
CD46-213ENST00000471987 COL3A1P02461 1466 aaPredicted RBP6.12□□□□□ -1.43
CD46-213ENST00000471987 NR2F6P10588 404 aa6.12□□□□□ -1.43
CD46-213ENST00000471987 AMPD3Q01432 767 aa6.12□□□□□ -1.43
CD46-213ENST00000471987 TCF15Q12870 199 aa6.12□□□□□ -1.43
CD46-213ENST00000471987 TAF2Q6P1X5 1199 aa6.12□□□□□ -1.43
CD46-213ENST00000471987 GLCCI1Q86VQ1 547 aa6.12□□□□□ -1.43
CD46-213ENST00000471987 FAM90A1Q86YD7 464 aa6.12□□□□□ -1.43
CD46-213ENST00000471987 SMOC2Q9H3U7 446 aa6.12□□□□□ -1.43
CD46-213ENST00000471987 ZDHHC8Q9ULC8 765 aa6.12□□□□□ -1.43
CD46-213ENST00000471987 PADI4Q9UM07 663 aa6.12□□□□□ -1.43
CD46-213ENST00000471987 PCDHA3Q9Y5H8 950 aa6.12□□□□□ -1.43
CD46-213ENST00000471987 AOX1Q06278 1338 aa6.11□□□□□ -1.43
CD46-213ENST00000471987 ZRANB2O95218 330 aaKnown RBP eCLIP6.11□□□□□ -1.43
CD46-213ENST00000471987 ZFXP17010 805 aaPredicted RBP6.11□□□□□ -1.43
CD46-213ENST00000471987 CCT8P50990 548 aa6.11□□□□□ -1.43
CD46-213ENST00000471987 BMPR2Q13873 1038 aa6.11□□□□□ -1.43
CD46-213ENST00000471987 RBM20Q5T481 1227 aaKnown RBP6.11□□□□□ -1.43
CD46-213ENST00000471987 SUMO4Q6EEV6 95 aa6.11□□□□□ -1.43
CD46-213ENST00000471987 CAMKK1Q8N5S9 505 aa6.11□□□□□ -1.43
CD46-213ENST00000471987 DPF1Q92782 380 aa6.11□□□□□ -1.43
CD46-213ENST00000471987 DDX17Q92841 729 aaKnown RBP6.11□□□□□ -1.43
CD46-213ENST00000471987 NAF1Q96HR8 494 aaKnown RBP6.11□□□□□ -1.43
CD46-213ENST00000471987 C1orf43Q9BWL3 253 aa6.11□□□□□ -1.43
CD46-213ENST00000471987 TINAGL1Q9GZM7 467 aaPredicted RBP6.11□□□□□ -1.43
CD46-213ENST00000471987 FEZ2Q9UHY8 353 aaPredicted RBP6.11□□□□□ -1.43
CD46-213ENST00000471987 RAD54BQ9Y620 910 aa6.11□□□□□ -1.43
CD46-213ENST00000471987 KAT6AQ92794 2004 aa6.11□□□□□ -1.43
CD46-213ENST00000471987 WASHC2CQ9Y4E1 1318 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 VPS4BO75351 444 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 KIF20AO95235 890 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 GNAI2P04899 355 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 CELA2AP08217 269 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 EBLN1P0CF75 366 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 PDCP20941 246 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 DRD4P21917 467 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 CD6P30203 668 aa6.1□□□□□ -1.43
CD46-213ENST00000471987 PHKA1P46020 1223 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms