RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 CFAP97Q9P2B7 532 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 ZDHHC8Q9ULC8 765 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 AGAP1Q9UPQ3 857 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 ADGRA2Q96PE1 1338 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 POLRMTO00411 1230 aaKnown RBP4.1□□□□□ -1.75
COPS3-206ENST00000471414 TOR1BO14657 336 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 RARBP10826 455 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 SOX10P56693 466 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 THEMIS2Q5TEJ8 643 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 EMC10Q5UCC4 262 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 TAF2Q6P1X5 1199 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 GRASPQ7Z6J2 395 aaPredicted RBP4.1□□□□□ -1.75
COPS3-206ENST00000471414 ARHGEF25Q86VW2 580 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 SH2D3CQ8N5H7 860 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 TFAP2BQ92481 460 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 RFKQ969G6 155 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 RGMAQ96B86 450 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 FBXL20Q96IG2 436 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 PBKQ96KB5 322 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 NUP88Q99567 741 aaPredicted RBP4.1□□□□□ -1.75
COPS3-206ENST00000471414 HEPHQ9BQS7 1158 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 CNPPD1Q9BV87 410 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 SPATA5L1Q9BVQ7 753 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 C1orf43Q9BWL3 253 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 TINAGL1Q9GZM7 467 aaPredicted RBP4.1□□□□□ -1.75
COPS3-206ENST00000471414 SMOC2Q9H3U7 446 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 IL17RBQ9NRM6 502 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 KLC4Q9NSK0 619 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 ASB6Q9NWX5 421 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 ADAM21Q9UKJ8 722 aa4.1□□□□□ -1.75
COPS3-206ENST00000471414 COL3A1P02461 1466 aaPredicted RBP4.1□□□□□ -1.75
COPS3-206ENST00000471414 A0A0B4J269 797 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 LINC00473A8K010 186 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 ZNF785A8K8V0 405 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 SOAT2O75908 522 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 GNAI3P08754 354 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 TYRP14679 529 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 NDUFV1P49821 464 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 MAP2K6P52564 334 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 ZNF135P52742 658 aaPredicted RBP4.09□□□□□ -1.75
COPS3-206ENST00000471414 GNAI1P63096 354 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 TUBB3Q13509 450 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 ZKSCAN2Q63HK3 967 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 ZNF788Q6ZQV5 615 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 HEATR3Q7Z4Q2 680 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 PPP1R3BQ86XI6 285 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 PSD4Q8NDX1 1056 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 CHMP4CQ96CF2 233 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 FAM167AQ96KS9 214 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 SMAD5Q99717 465 aaKnown RBP4.09□□□□□ -1.75
COPS3-206ENST00000471414 GTPBP4Q9BZE4 634 aaKnown RBP4.09□□□□□ -1.75
COPS3-206ENST00000471414 AMBRA1Q9C0C7 1298 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 HOMER2Q9NSB8 354 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 PCDHA3Q9Y5H8 950 aa4.09□□□□□ -1.75
COPS3-206ENST00000471414 DTNBO60941 627 aa4.08□□□□□ -1.76
COPS3-206ENST00000471414 SNUPNO95149 360 aaKnown RBP4.08□□□□□ -1.76
COPS3-206ENST00000471414 RHOP08100 348 aa4.08□□□□□ -1.76
COPS3-206ENST00000471414 CHRM2P08172 466 aa4.08□□□□□ -1.76
COPS3-206ENST00000471414 AKAP5P24588 427 aa4.08□□□□□ -1.76
COPS3-206ENST00000471414 SMARCA1P28370 1054 aa4.08□□□□□ -1.76
COPS3-206ENST00000471414 PSMC1P62191 440 aaKnown RBP4.08□□□□□ -1.76
COPS3-206ENST00000471414 NKX6-1P78426 367 aaPredicted RBP4.08□□□□□ -1.76
COPS3-206ENST00000471414 EXOSC10Q01780 885 aaKnown RBP4.08□□□□□ -1.76
COPS3-206ENST00000471414 AOX1Q06278 1338 aa4.08□□□□□ -1.76
COPS3-206ENST00000471414 BOP1Q14137 746 aaKnown RBP4.08□□□□□ -1.76
COPS3-206ENST00000471414 PREPLQ4J6C6 727 aaPredicted RBP4.08□□□□□ -1.76
COPS3-206ENST00000471414 TOR1AIP2Q8NFQ8 470 aa4.08□□□□□ -1.76
COPS3-206ENST00000471414 ZCRB1Q8TBF4 217 aaKnown RBP4.08□□□□□ -1.76
COPS3-206ENST00000471414 FBXO41Q8TF61 875 aa4.08□□□□□ -1.76
COPS3-206ENST00000471414 ZNF384Q8TF68 577 aa4.08□□□□□ -1.76
COPS3-206ENST00000471414 DPF1Q92782 380 aa4.08□□□□□ -1.76
COPS3-206ENST00000471414 HSPBAP1Q96EW2 488 aa4.08□□□□□ -1.76
COPS3-206ENST00000471414 ALG8Q9BVK2 526 aa4.08□□□□□ -1.76
COPS3-206ENST00000471414 ABCF2Q9UG63 623 aa4.08□□□□□ -1.76
COPS3-206ENST00000471414 GCOM1H8Y6P7 765 aaPredicted RBP4.07□□□□□ -1.76
COPS3-206ENST00000471414 TRIAP1O43715 76 aa4.07□□□□□ -1.76
COPS3-206ENST00000471414 ORC4O43929 436 aa4.07□□□□□ -1.76
COPS3-206ENST00000471414 KIF20AO95235 890 aa4.07□□□□□ -1.76
COPS3-206ENST00000471414 CCND1P24385 295 aa4.07□□□□□ -1.76
COPS3-206ENST00000471414 NEK2P51955 445 aa4.07□□□□□ -1.76
COPS3-206ENST00000471414 PTPROQ16827 1216 aa4.07□□□□□ -1.76
COPS3-206ENST00000471414 PGS1Q32NB8 556 aa4.07□□□□□ -1.76
COPS3-206ENST00000471414 ATAT1Q5SQI0 421 aa4.07□□□□□ -1.76
COPS3-206ENST00000471414 CATIPQ7Z7H3 387 aa4.07□□□□□ -1.76
COPS3-206ENST00000471414 B3GALNT2Q8NCR0 500 aa4.07□□□□□ -1.76
COPS3-206ENST00000471414 DDX17Q92841 729 aaKnown RBP4.07□□□□□ -1.76
COPS3-206ENST00000471414 SIK2Q9H0K1 926 aa4.07□□□□□ -1.76
COPS3-206ENST00000471414 SLC12A5Q9H2X9 1139 aa4.07□□□□□ -1.76
COPS3-206ENST00000471414 KMT5AQ9NQR1 393 aa4.07□□□□□ -1.76
COPS3-206ENST00000471414 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.07□□□□□ -1.76
COPS3-206ENST00000471414 TYW1Q9NV66 732 aaKnown RBP4.07□□□□□ -1.76
COPS3-206ENST00000471414 FEZ2Q9UHY8 353 aaPredicted RBP4.07□□□□□ -1.76
COPS3-206ENST00000471414 LUC7L2Q9Y383 392 aaKnown RBP4.07□□□□□ -1.76
COPS3-206ENST00000471414 DNAJB5O75953 348 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 URI1O94763 535 aaPredicted RBP4.06□□□□□ -1.76
COPS3-206ENST00000471414 ABLIM3O94929 683 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 AHSGP02765 367 aa4.06□□□□□ -1.76
COPS3-206ENST00000471414 FTLP02792 175 aaPredicted RBP4.06□□□□□ -1.76
COPS3-206ENST00000471414 PIM1P11309 404 aaPredicted RBP4.06□□□□□ -1.76
COPS3-206ENST00000471414 GPD1P21695 349 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms