RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 NCANO14594 1321 aa18.66■□□□□ 0.58
HSPG2-208ENST00000471322 UNC80Q8N2C7 3258 aa18.66■□□□□ 0.58
HSPG2-208ENST00000471322 CXCL8P10145 99 aa18.66■□□□□ 0.58
HSPG2-208ENST00000471322 CHRNB2P17787 502 aa18.66■□□□□ 0.58
HSPG2-208ENST00000471322 ACO1P21399 889 aaKnown RBP18.66■□□□□ 0.58
HSPG2-208ENST00000471322 GRM5P41594 1212 aa18.66■□□□□ 0.58
HSPG2-208ENST00000471322 HTRA4P83105 476 aaPredicted RBP18.66■□□□□ 0.58
HSPG2-208ENST00000471322 TAP1Q03518 808 aa18.66■□□□□ 0.58
HSPG2-208ENST00000471322 TCEAL1Q15170 157 aa18.66■□□□□ 0.58
HSPG2-208ENST00000471322 ECHDC2Q86YB7 292 aa18.66■□□□□ 0.58
HSPG2-208ENST00000471322 ANKRD7Q92527 254 aa18.66■□□□□ 0.58
HSPG2-208ENST00000471322 LPPQ93052 612 aa18.66■□□□□ 0.58
HSPG2-208ENST00000471322 FAM84AQ96KN4 292 aa18.66■□□□□ 0.58
HSPG2-208ENST00000471322 CHST12Q9NRB3 414 aa18.66■□□□□ 0.58
HSPG2-208ENST00000471322 NUB1Q9Y5A7 615 aa18.66■□□□□ 0.58
HSPG2-208ENST00000471322 A0A0U1RQF3 1178 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 LINC01553A4QN01 128 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 MEIS3P2A8K0S8 358 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 LACTBL1A8MY62 500 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 DGKIO75912 1065 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 CST3P01034 146 aaPredicted RBP18.65■□□□□ 0.58
HSPG2-208ENST00000471322 FTLP02792 175 aaPredicted RBP18.65■□□□□ 0.58
HSPG2-208ENST00000471322 YWHAEP62258 255 aaKnown RBP18.65■□□□□ 0.58
HSPG2-208ENST00000471322 FMO1Q01740 532 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 GRIN2CQ14957 1233 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 SPOPLQ6IQ16 392 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 PPP1R2P3Q6NXS1 205 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 NOTUMQ6P988 496 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 SLC27A1Q6PCB7 646 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 RHOT2Q8IXI1 618 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 CEP120Q8N960 986 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 DDX1Q92499 740 aaKnown RBP18.65■□□□□ 0.58
HSPG2-208ENST00000471322 RABGGTAQ92696 567 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 CCDC94Q9BW85 323 aaPredicted RBP18.65■□□□□ 0.58
HSPG2-208ENST00000471322 EIF2AQ9BY44 585 aaKnown RBP18.65■□□□□ 0.58
HSPG2-208ENST00000471322 NIF3L1Q9GZT8 377 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 PLEKHA5Q9HAU0 1116 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 RNF14Q9UBS8 474 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 PCDHB4Q9Y5E5 795 aa18.65■□□□□ 0.58
HSPG2-208ENST00000471322 GRID2IPA4D2P6 1211 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 TMCO5BA8MYB1 307 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 CLSTN1O94985 981 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 ATF7P17544 494 aaPredicted RBP18.64■□□□□ 0.57
HSPG2-208ENST00000471322 MYL6P60660 151 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 GPC5P78333 572 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 FAM189BP81408 668 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 ERCC6LQ2NKX8 1250 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 TAF3Q5VWG9 929 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 TRIM72Q6ZMU5 477 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 RSRC2Q7L4I2 434 aaKnown RBP18.64■□□□□ 0.57
HSPG2-208ENST00000471322 EFCAB13Q8IY85 973 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 LRRN4CLQ8ND94 238 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 TPCN2Q8NHX9 752 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 ARNTL2Q8WYA1 636 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 FAM105AQ9NUU6 356 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 TMEM161AQ9NX61 479 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 HCSTQ9UBK5 93 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 C2CD2Q9Y426 696 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 HES2Q9Y543 173 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 A0A0C4DFX4 3053 aa18.64■□□□□ 0.57
HSPG2-208ENST00000471322 SPTBN5Q9NRC6 3674 aaKnown RBP18.64■□□□□ 0.57
HSPG2-208ENST00000471322 TBKBP1A7MCY6 615 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 RFXAPO00287 272 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 MMEP08473 750 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 ATICP31939 592 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 HADHBP55084 474 aaKnown RBP18.63■□□□□ 0.57
HSPG2-208ENST00000471322 BTG3Q14201 252 aaPredicted RBP18.63■□□□□ 0.57
HSPG2-208ENST00000471322 ZNF699Q32M78 642 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 SLC10A6Q3KNW5 377 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 UBXN11Q5T124 520 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 MEI1Q5TIA1 1274 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 GPR153Q6NV75 609 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 SLC35G2Q8TBE7 412 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 OSBPL9Q96SU4 736 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 PCDHB18PQ96TA0 734 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 ARID3AQ99856 593 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 C17orf80Q9BSJ5 609 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 TLR10Q9BXR5 811 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 PRDM12Q9H4Q4 367 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 TAS2R14Q9NYV8 317 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 PUF60Q9UHX1 559 aaKnown RBP18.63■□□□□ 0.57
HSPG2-208ENST00000471322 DERAQ9Y315 318 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 TMEM132DQ14C87 1099 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 ELF2Q15723 593 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 ACAD10Q6JQN1 1059 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 TMEM270Q6UE05 265 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 SLFN11Q7Z7L1 901 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 PALB2Q86YC2 1186 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 TMEM192Q8IY95 271 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 GPR161Q8N6U8 529 aaKnown RBP18.63■□□□□ 0.57
HSPG2-208ENST00000471322 LRRC57Q8N9N7 239 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 ZNF689Q96CS4 500 aaPredicted RBP18.63■□□□□ 0.57
HSPG2-208ENST00000471322 APOL6Q9BWW8 343 aa18.63■□□□□ 0.57
HSPG2-208ENST00000471322 RC3H2Q9HBD1 1191 aaKnown RBP18.63■□□□□ 0.57
HSPG2-208ENST00000471322 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.63■□□□□ 0.57
HSPG2-208ENST00000471322 V9GYY5 206 aaPredicted RBP18.63■□□□□ 0.57
HSPG2-208ENST00000471322 EPOPA6NHQ4 379 aa18.62■□□□□ 0.57
HSPG2-208ENST00000471322 ABCB4P21439 1286 aa18.62■□□□□ 0.57
HSPG2-208ENST00000471322 NAA30Q147X3 362 aaPredicted RBP18.62■□□□□ 0.57
HSPG2-208ENST00000471322 RPS6KA1Q15418 735 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms