RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 TRPC4Q9UBN4 977 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 VAV3Q9UKW4 847 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 PNMA3Q9UL41 463 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 SNX6Q9UNH7 406 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 EIF3LQ9Y262 564 aaKnown RBP7.18□□□□□ -1.26
BRCA1-210ENST00000471181 PLXNC1O60486 1568 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 SCAF11Q99590 1463 aaKnown RBP7.18□□□□□ -1.26
BRCA1-210ENST00000471181 CYP2D7A0A087X1C5 515 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 PRRG1O14668 218 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 PSTPIP1O43586 416 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 PGM3O95394 542 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 HLA-DQA2P01906 255 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 MYBP10242 640 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 DSG3P32926 999 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 AKR1D1P51857 326 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 LGALS3BPQ08380 585 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 ORC2Q13416 577 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-210ENST00000471181 DGKDQ16760 1214 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 LRRC8DQ7L1W4 858 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-210ENST00000471181 SYTL1Q8IYJ3 562 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 DNAJC9Q8WXX5 260 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 PAGE5Q96GU1 130 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 INTS2Q9H0H0 1204 aaKnown RBP7.18□□□□□ -1.26
BRCA1-210ENST00000471181 BHMT2Q9H2M3 363 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 RANBP17Q9H2T7 1088 aaKnown RBP7.18□□□□□ -1.26
BRCA1-210ENST00000471181 ZNF302Q9NR11 478 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 KLF15Q9UIH9 416 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 SNX8Q9Y5X2 465 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 ECDO95905 644 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-210ENST00000471181 CCNE1P24864 410 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 PIK3R1P27986 724 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 CPA2P48052 419 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 BTN3A2P78410 334 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 CACHD1Q5VU97 1274 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 TMC4Q7Z404 712 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 GAL3ST3Q96A11 431 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 GRAMD1AQ96CP6 724 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 SPACA7Q96KW9 195 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 SLC4A9Q96Q91 983 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 ZNF341Q9BYN7 854 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 FOXP3Q9BZS1 431 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 DDX47Q9H0S4 455 aaKnown RBP7.18□□□□□ -1.26
BRCA1-210ENST00000471181 FOXP1Q9H334 677 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-210ENST00000471181 NMRK2Q9NPI5 230 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 CRLS1Q9UJA2 301 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 MAFFQ9ULX9 164 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 USP19O94966 1318 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 PIK3CDO00329 1044 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 STX7O15400 261 aaKnown RBP7.18□□□□□ -1.26
BRCA1-210ENST00000471181 PSMD3O43242 534 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 ADCY6O43306 1168 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 CNOT3O75175 753 aaKnown RBP7.18□□□□□ -1.26
BRCA1-210ENST00000471181 RAD17O75943 681 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 CNPP09543 421 aaKnown RBP7.18□□□□□ -1.26
BRCA1-210ENST00000471181 CCT8P50990 548 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 OTUD4Q01804 1114 aaKnown RBP7.18□□□□□ -1.26
BRCA1-210ENST00000471181 OLFML2AQ68BL7 652 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 USP17L2Q6R6M4 530 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 WDR60Q8WVS4 1066 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 TNIP3Q96KP6 325 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 NFKBIZQ9BYH8 718 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 USP21Q9UK80 565 aa7.18□□□□□ -1.26
BRCA1-210ENST00000471181 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-210ENST00000471181 TIPRLO75663 272 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 TCEA3O75764 348 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 RGS20O76081 388 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 CCDC166P0CW27 439 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 ATP5JP18859 108 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 HNMTP50135 292 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 ARHGDIBP52566 201 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 ABATP80404 500 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 CAMK2GQ13555 558 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-210ENST00000471181 SEC16BQ96JE7 1060 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 ATP6V1G3Q96LB4 118 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 PANX2Q96RD6 677 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 CAMKK2Q96RR4 588 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 CLCC1Q96S66 551 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 CCDC3Q9BQI4 270 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 BHLHE41Q9C0J9 482 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-210ENST00000471181 POLR3FQ9H1D9 316 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-210ENST00000471181 DLGAP2Q9P1A6 1054 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 CEP72Q9P209 647 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 RBM7Q9Y580 266 aaKnown RBP7.17□□□□□ -1.26
BRCA1-210ENST00000471181 MROH1Q8NDA8 1641 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 EEF2KO00418 725 aaKnown RBP7.17□□□□□ -1.26
BRCA1-210ENST00000471181 GUCY1B2O75343 617 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 TADA2AO75478 443 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 RBMXL2O75526 392 aaKnown RBP7.17□□□□□ -1.26
BRCA1-210ENST00000471181 PDE9AO76083 593 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 PNMA6AP0CW24 399 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-210ENST00000471181 TRAP1Q12931 704 aaKnown RBP7.17□□□□□ -1.26
BRCA1-210ENST00000471181 MTMR1Q13613 665 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 CYP4A22Q5TCH4 519 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 PMF1Q6P1K2 205 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 FBXO38Q6PIJ6 1188 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 VSTM4Q8IW00 320 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 PHACTR4Q8IZ21 702 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 C4orf33Q8N1A6 199 aa7.17□□□□□ -1.26
BRCA1-210ENST00000471181 IPMKQ8NFU5 416 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms