RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 EGFP01133 1207 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 OATP04181 439 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 C8BP07358 591 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 SERPINF2P08697 491 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 PDIA3P30101 505 aaKnown RBP6.48□□□□□ -1.37
VARS-222ENST00000470953 ANAPC15P60006 121 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 FOXK1P85037 733 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 SETQ01105 290 aaPredicted RBP6.48□□□□□ -1.37
VARS-222ENST00000470953 PRKCEQ02156 737 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 CACNB1Q02641 598 aaPredicted RBP6.48□□□□□ -1.37
VARS-222ENST00000470953 SRSF11Q05519 484 aaKnown RBP6.48□□□□□ -1.37
VARS-222ENST00000470953 VAC14Q08AM6 782 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 FCHO2Q0JRZ9 810 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 TEAD2Q15562 447 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 DUOXA1Q1HG43 343 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 USP39Q53GS9 565 aaKnown RBP6.48□□□□□ -1.37
VARS-222ENST00000470953 STXBP5Q5T5C0 1151 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 BROXQ5VW32 411 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 POTEDQ86YR6 584 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 RHPN2Q8IUC4 686 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 SNRNP27Q8WVK2 155 aaKnown RBP6.48□□□□□ -1.37
VARS-222ENST00000470953 HIC2Q96JB3 615 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 LARP6Q9BRS8 491 aaKnown RBP6.48□□□□□ -1.37
VARS-222ENST00000470953 CXCL16Q9H2A7 254 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 BRMS1Q9HCU9 246 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 VPS54Q9P1Q0 977 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 SUCLA2Q9P2R7 463 aaPredicted RBP6.48□□□□□ -1.37
VARS-222ENST00000470953 CDY1Q9Y6F8 540 aa6.48□□□□□ -1.37
VARS-222ENST00000470953 SF3B1O75533 1304 aaKnown RBP eCLIP6.48□□□□□ -1.37
VARS-222ENST00000470953 HIVEP3Q5T1R4 2406 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 NIPBLQ6KC79 2804 aaeCLIP6.47□□□□□ -1.37
VARS-222ENST00000470953 MED13Q9UHV7 2174 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 KNL1Q8NG31 2342 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 FBN1P35555 2871 aaKnown RBP6.47□□□□□ -1.37
VARS-222ENST00000470953 IGKV6-21A0A0C4DH24 114 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 ARHGEF37A1IGU5 675 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 A1L4Q6 167 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 CASTOR2A6NHX0 329 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 IPO5O00410 1097 aaKnown RBP6.47□□□□□ -1.37
VARS-222ENST00000470953 STBD1O95210 358 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 PSAPP07602 524 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 IFNAR1P17181 557 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 AKAP5P24588 427 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 SREBF1P36956 1147 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 UCNP55089 124 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 FUT2Q10981 343 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 TOB2Q14106 344 aaPredicted RBP6.47□□□□□ -1.37
VARS-222ENST00000470953 TRIM29Q14134 588 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 HSP90AA2PQ14568 343 aaPredicted RBP6.47□□□□□ -1.37
VARS-222ENST00000470953 NBR1Q14596 966 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 RTP5Q14D33 572 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 TMEM196Q5HYL7 178 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 LYSMD4Q5XG99 296 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 TYW1BQ6NUM6 668 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 PDZD4Q76G19 769 aaPredicted RBP6.47□□□□□ -1.37
VARS-222ENST00000470953 LPCAT2Q7L5N7 544 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 ZNF410Q86VK4 478 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 PLA2G4DQ86XP0 818 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 YAF2Q8IY57 180 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 FBXL16Q8N461 479 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 WASF1Q92558 559 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 EZH1Q92800 747 aaPredicted RBP6.47□□□□□ -1.37
VARS-222ENST00000470953 ZNF274Q96GC6 653 aaPredicted RBP6.47□□□□□ -1.37
VARS-222ENST00000470953 FNBP1Q96RU3 617 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 TMEM209Q96SK2 561 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 ZNF577Q9BSK1 485 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 C22orf23Q9BZE7 217 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 NXF3Q9H4D5 531 aaKnown RBP6.47□□□□□ -1.37
VARS-222ENST00000470953 KLK14Q9P0G3 267 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 CEP72Q9P209 647 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 SAMM50Q9Y512 469 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 PCDHA10Q9Y5I2 948 aa6.47□□□□□ -1.37
VARS-222ENST00000470953 ADAMTS3O15072 1205 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 MARCH6O60337 910 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 NR1I2O75469 434 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 MICAL2O94851 1124 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 MYL4P12829 197 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 U2AF2P26368 475 aaKnown RBP eCLIP6.46□□□□□ -1.38
VARS-222ENST00000470953 NEK4P51957 841 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 FOSBP53539 338 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 DMC1Q14565 340 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 TBC1D25Q3MII6 688 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 LINC00303Q3SY05 128 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 MTERF2Q49AM1 385 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 PRR16Q569H4 304 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 RPLP0P6Q8NHW5 317 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 CEP76Q8TAP6 659 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 SHKBP1Q8TBC3 707 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 RLN3Q8WXF3 142 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 GJA10Q969M2 543 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 CPB2Q96IY4 423 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 FAM167AQ96KS9 214 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 AGXT2Q9BYV1 514 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 INO80BQ9C086 356 aaPredicted RBP6.46□□□□□ -1.38
VARS-222ENST00000470953 ZMYND12Q9H0C1 365 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 EPN3Q9H201 632 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 UBN1Q9NPG3 1134 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 RTN4Q9NQC3 1192 aaKnown RBP6.46□□□□□ -1.38
VARS-222ENST00000470953 SH3GLB2Q9NR46 395 aa6.46□□□□□ -1.38
VARS-222ENST00000470953 NRBP2Q9NSY0 501 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms