RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 KDM4FA0A1W2PPD8 638 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 SRGAP2CP0DJJ0 459 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 PYGBP11216 843 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 OSBPP22059 807 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 CA8P35219 290 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 PLOD1Q02809 727 aaPredicted RBP14.88□□□□□ -0.03
HDAC7-219ENST00000470668 NFX1Q12986 1120 aaKnown RBP14.88□□□□□ -0.03
HDAC7-219ENST00000470668 USP4Q13107 963 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 C11orf63Q6NUN7 778 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 WDR60Q8WVS4 1066 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 ZNF512BQ96KM6 892 aaPredicted RBP14.88□□□□□ -0.03
HDAC7-219ENST00000470668 POLR3CQ9BUI4 534 aaPredicted RBP14.88□□□□□ -0.03
HDAC7-219ENST00000470668 TDRD3Q9H7E2 651 aaKnown RBP14.88□□□□□ -0.03
HDAC7-219ENST00000470668 NMRK1Q9NWW6 199 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 MED7O43513 233 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 KLRC4O43908 158 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 GH2P01242 217 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 IGBP1P78318 339 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 TEDDM1Q5T9Z0 273 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 TMPRSS6Q8IU80 811 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 ATP6V1E2Q96A05 226 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 ELMO3Q96BJ8 720 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 ANKRD36BP1Q96IX9 119 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 CHST7Q9NS84 486 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 MED24O75448 989 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 RRM1P23921 792 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 RIPK1Q13546 671 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 LACTB2Q53H82 288 aaPredicted RBP14.88□□□□□ -0.03
HDAC7-219ENST00000470668 CWF19L1Q69YN2 538 aaKnown RBP14.88□□□□□ -0.03
HDAC7-219ENST00000470668 TXNRD3Q86VQ6 643 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 DEFB107AQ8IZN7 70 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 SPATA18Q8TC71 538 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 USP6NLQ92738 828 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 RIOK1Q9BRS2 568 aaKnown RBP14.88□□□□□ -0.03
HDAC7-219ENST00000470668 TMEM121Q9BTD3 319 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 FAM192AQ9GZU8 254 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 CYP26B1Q9NR63 512 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 LRRC4BQ9NT99 713 aa14.88□□□□□ -0.03
HDAC7-219ENST00000470668 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.88□□□□□ -0.03
HDAC7-219ENST00000470668 ATXN2Q99700 1313 aaKnown RBP14.87□□□□□ -0.03
HDAC7-219ENST00000470668 A0A0A6YYK5 440 aaPredicted RBP14.87□□□□□ -0.03
HDAC7-219ENST00000470668 STRNO43815 780 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 NTSR2O95665 410 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 MMP13P45452 471 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 GPSM2P81274 684 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 ACAP1Q15027 740 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 TTC33Q6PID6 262 aaPredicted RBP14.87□□□□□ -0.03
HDAC7-219ENST00000470668 KCNK18Q7Z418 384 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 EIF1ADQ8N9N8 165 aaKnown RBP14.87□□□□□ -0.03
HDAC7-219ENST00000470668 LINC00116Q8NCU8 138 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 MAGEC3Q8TD91 643 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 SCFD2Q8WU76 684 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 INPP5DQ92835 1189 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 ZNF668Q96K58 619 aaPredicted RBP14.87□□□□□ -0.03
HDAC7-219ENST00000470668 CEP19Q96LK0 163 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 UNC45AQ9H3U1 944 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 MAD2L2Q9UI95 211 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 F5H6K3 240 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 KRT75O95678 551 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 PSMC3P17980 439 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 RASA1P20936 1047 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 MARCKSL1P49006 195 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 NEK2P51955 445 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 KLRC3Q07444 240 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 GRM1Q13255 1194 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 FASTKD1Q53R41 847 aaKnown RBP14.87□□□□□ -0.03
HDAC7-219ENST00000470668 FAM102AQ5T9C2 384 aaPredicted RBP14.87□□□□□ -0.03
HDAC7-219ENST00000470668 ZBTB46Q86UZ6 589 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 EGFL6Q8IUX8 553 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 NLGN1Q8N2Q7 840 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 GDPD5Q8WTR4 605 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 KLHL25Q9H0H3 589 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 AGPAT3Q9NRZ7 376 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 FKBP6O75344 327 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 SLC4A1P02730 911 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 RPS6KA3P51812 740 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 CENPCQ03188 943 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 HEATR6Q6AI08 1181 aaKnown RBP14.87□□□□□ -0.03
HDAC7-219ENST00000470668 ZNF662Q6ZS27 426 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 CDR2LQ86X02 465 aaPredicted RBP14.87□□□□□ -0.03
HDAC7-219ENST00000470668 MCF2L2Q86YR7 1114 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 PPP1R16BQ96T49 567 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 MTRQ99707 1265 aa14.87□□□□□ -0.03
HDAC7-219ENST00000470668 DAB1O75553 588 aa14.86□□□□□ -0.03
HDAC7-219ENST00000470668 RPA3P35244 121 aaPredicted RBP14.86□□□□□ -0.03
HDAC7-219ENST00000470668 SERPINB5P36952 375 aa14.86□□□□□ -0.03
HDAC7-219ENST00000470668 INPP1P49441 399 aa14.86□□□□□ -0.03
HDAC7-219ENST00000470668 ACOT2P49753 483 aa14.86□□□□□ -0.03
HDAC7-219ENST00000470668 PSMD7P51665 324 aa14.86□□□□□ -0.03
HDAC7-219ENST00000470668 ACTR2P61160 394 aa14.86□□□□□ -0.03
HDAC7-219ENST00000470668 BMPR2Q13873 1038 aa14.86□□□□□ -0.03
HDAC7-219ENST00000470668 SNRNP35Q16560 246 aaKnown RBP14.86□□□□□ -0.03
HDAC7-219ENST00000470668 PLEKHA7Q6IQ23 1121 aa14.86□□□□□ -0.03
HDAC7-219ENST00000470668 AGAP3Q96P47 875 aa14.86□□□□□ -0.03
HDAC7-219ENST00000470668 TAGLN3Q9UI15 199 aa14.86□□□□□ -0.03
HDAC7-219ENST00000470668 SCAF8Q9UPN6 1271 aaKnown RBP14.86□□□□□ -0.03
HDAC7-219ENST00000470668 V9GYQ6 96 aa14.86□□□□□ -0.03
HDAC7-219ENST00000470668 ATP9BO43861 1147 aa14.86□□□□□ -0.03
HDAC7-219ENST00000470668 RPA1P27694 616 aa14.86□□□□□ -0.03
HDAC7-219ENST00000470668 LPCAT2Q7L5N7 544 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms