RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 PQBP1O60828 265 aaKnown RBP5.17□□□□□ -1.58
SF3B1-208ENST00000470268 DNAJA1P31689 397 aaKnown RBP5.17□□□□□ -1.58
SF3B1-208ENST00000470268 THPOP40225 353 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 MBTD1Q05BQ5 628 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 MGAT3Q09327 533 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 GPNMBQ14956 572 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 IQCB1Q15051 598 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 POU4F3Q15319 338 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 ZCWPW2Q504Y3 356 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 ANKRD40Q6AI12 368 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 CENPPQ6IPU0 288 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 TTI2Q6NXR4 508 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 BNC2Q6ZN30 1099 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-208ENST00000470268 ANKRD33Q7Z3H0 272 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 RPAINQ86UA6 219 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 LUZP1Q86V48 1076 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 SLITRK4Q8IW52 837 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 DHX40Q8IX18 779 aaKnown RBP5.17□□□□□ -1.58
SF3B1-208ENST00000470268 MYOCDQ8IZQ8 938 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 GALNT11Q8NCW6 608 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 ZSWIM2Q8NEG5 633 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 KCNN1Q92952 543 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 IFT74Q96LB3 600 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 MAP7D2Q96T17 732 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 CORO1BQ9BR76 489 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 NFKBIZQ9BYH8 718 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 HAPLN2Q9GZV7 340 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 MRPL18Q9H0U6 180 aaKnown RBP5.17□□□□□ -1.58
SF3B1-208ENST00000470268 HSD3B7Q9H2F3 369 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 FZD8Q9H461 694 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 C11orf49Q9H6J7 331 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 AKTIPQ9H8T0 292 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 TBX20Q9UMR3 447 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 CTNND2Q9UQB3 1225 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 UMODL1Q5DID0 1318 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 DLL1O00548 723 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 ABLIM1O14639 778 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 EIF3DO15371 548 aaKnown RBP eCLIP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 CILPO75339 1184 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 DEAF1O75398 565 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 CKBP12277 381 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 DARSP14868 501 aaKnown RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 CCNE1P24864 410 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 ITGB8P26012 769 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 ADSSP30520 456 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 SOX9P48436 509 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 ZNF165P49910 485 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 MRPS6P82932 125 aaKnown RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 TLE2Q04725 743 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 POU5F1BQ06416 359 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 MPP2Q14168 576 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 PPP2R5AQ15172 486 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 KNOP1Q1ED39 458 aaKnown RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 HP1BP3Q5SSJ5 553 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 ZNF618Q5T7W0 954 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 CDR2LQ86X02 465 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 NME8Q8N427 588 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 DEPTORQ8TB45 409 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 NELFBQ8WX92 580 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 P2RX5Q93086 422 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 CCDC47Q96A33 483 aaKnown RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 ABHD8Q96I13 439 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 ZBTB45Q96K62 511 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 CELF4Q9BZC1 486 aaKnown RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 AGO3Q9H9G7 860 aaKnown RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 UBP1Q9NZI7 540 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 CDY2AQ9Y6F7 541 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 INO80B-WBP1J3KQ70 363 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 K7ERI5 159 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 CLIC2O15247 247 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 TSPAN1O60635 241 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 MAOBP27338 520 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 HOXA11P31270 313 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 CD68P34810 354 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 CRYBB1P53674 252 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 PAK1Q13153 545 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 TFDP1Q14186 410 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 MAPK6Q16659 721 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 HSP90AA4PQ58FG1 418 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 EEF1DP3Q658K8 133 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 LRRC55Q6ZSA7 311 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 NECAB2Q7Z6G3 386 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 ZNF410Q86VK4 478 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 FAM228AQ86W67 206 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 IRF2BP1Q8IU81 584 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 AOPEPQ8N6M6 819 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 ENOX1Q8TC92 643 aaKnown RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 VWCEQ96DN2 955 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 DHTKD1Q96HY7 919 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 ZNF830Q96NB3 372 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 TOX2Q96NM4 488 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 BPIFA3Q9BQP9 254 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 CBWD1Q9BRT8 395 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 TARS2Q9BW92 718 aaKnown RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 INO80BQ9C086 356 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 GBP3Q9H0R5 595 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 PTPRHQ9HD43 1115 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 AGPAT3Q9NRZ7 376 aa5.16□□□□□ -1.58
SF3B1-208ENST00000470268 SAMSN1Q9NSI8 373 aaKnown RBP5.16□□□□□ -1.58
SF3B1-208ENST00000470268 RWDD2AQ9UIY3 292 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms