RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 RAD23BP54727 409 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 PLCB3Q01970 1234 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 TAP1Q03518 808 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 SPOUT1Q5T280 376 aaKnown RBP12.03□□□□□ -0.48
SREBF1-209ENST00000470247 FAM171A1Q5VUB5 890 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 WDR59Q6PJI9 974 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 CHRDL2Q6WN34 429 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 CCDC186Q7Z3E2 898 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 CACNA2D4Q7Z3S7 1137 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 PPFIBP1Q86W92 1011 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 ADGRF2Q8IZF7 708 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 TMEM86AQ8N2M4 240 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 KLHL23Q8NBE8 558 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 APPL2Q8NEU8 664 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 OR8K1Q8NGG5 319 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 OLIG1Q8TAK6 271 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 SPATA18Q8TC71 538 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 SYN2Q92777 582 aaPredicted RBP12.03□□□□□ -0.48
SREBF1-209ENST00000470247 B3GALT6Q96L58 329 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 ZSWIM1Q9BR11 485 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 C17orf80Q9BSJ5 609 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 ACP6Q9NPH0 428 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 PCDHB4Q9Y5E5 795 aa12.03□□□□□ -0.48
SREBF1-209ENST00000470247 CARNS1A5YM72 827 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 C5orf67F2Z3F1 127 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 CYP26A1O43174 497 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 TRAPPC3O43617 180 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 FGF18O76093 207 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 ODC1P11926 461 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 FECHP22830 423 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 GNL1P36915 607 aaPredicted RBP12.02□□□□□ -0.49
SREBF1-209ENST00000470247 STAT1P42224 750 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 NDST1P52848 882 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 ERVK-21P61565 698 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 MEA1Q16626 185 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 RTP2Q5QGT7 225 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 HGSNATQ68CP4 663 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 TMEM270Q6UE05 265 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 DDX53Q86TM3 631 aaKnown RBP12.02□□□□□ -0.49
SREBF1-209ENST00000470247 GPIHBP1Q8IV16 184 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 CRYBG2Q8N1P7 616 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 SLC4A11Q8NBS3 891 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 SPAG5Q96R06 1193 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 LPIN3Q9BQK8 851 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 SYT11Q9BT88 431 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 AAASQ9NRG9 546 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 STXBP5LQ9Y2K9 1186 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 PCDHB12Q9Y5F1 795 aa12.02□□□□□ -0.49
SREBF1-209ENST00000470247 SF3B1O75533 1304 aaKnown RBP eCLIP12.02□□□□□ -0.492e-7■■■■■ 36.5
SREBF1-209ENST00000470247 TNRC18O15417 2968 aaPredicted RBP12.02□□□□□ -0.49
SREBF1-209ENST00000470247 VWA8A3KMH1 1905 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 LILRB3O75022 631 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 GFPT2O94808 682 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 SOD2P04179 222 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 PDGFRBP09619 1106 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 PPM1AP35813 382 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 PRKCIP41743 596 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 LHX1P48742 406 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 YWHAEP62258 255 aaKnown RBP12.01□□□□□ -0.49
SREBF1-209ENST00000470247 CCDC173Q0VFZ6 552 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 ELAVL2Q12926 359 aaKnown RBP12.01□□□□□ -0.49
SREBF1-209ENST00000470247 ORC1Q13415 861 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 CCDC142Q17RM4 750 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 ZNF394Q53GI3 561 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 VARS2Q5ST30 1063 aaKnown RBP12.01□□□□□ -0.49
SREBF1-209ENST00000470247 SFMBT2Q5VUG0 894 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 RSPO2Q6UXX9 243 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-209ENST00000470247 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-209ENST00000470247 SLC47A2Q86VL8 602 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 UNC93AQ86WB7 457 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 TMEM139Q8IV31 216 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 CNGA4Q8IV77 575 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 TTC39CQ8N584 583 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 RBBP8NLQ8NC74 664 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-209ENST00000470247 OR6B3Q8NGW1 331 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 OR10T2Q8NGX3 314 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 LNX1Q8TBB1 728 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-209ENST00000470247 SPPL3Q8TCT6 385 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 TFAP2BQ92481 460 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 DDX1Q92499 740 aaKnown RBP12.01□□□□□ -0.49
SREBF1-209ENST00000470247 ANP32BQ92688 251 aaKnown RBP12.01□□□□□ -0.49
SREBF1-209ENST00000470247 TMEM169Q96HH4 297 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 PKMYT1Q99640 499 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 HERC2P3Q9BVR0 1158 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 PLVAPQ9BX97 442 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 NKX2-4Q9H2Z4 354 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 DPEP3Q9H4B8 488 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 ABHD10Q9NUJ1 306 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 DDX43Q9NXZ2 648 aaKnown RBP12.01□□□□□ -0.49
SREBF1-209ENST00000470247 DSEQ9UL01 958 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 KIAA1671Q9BY89 1806 aa12.01□□□□□ -0.49
SREBF1-209ENST00000470247 GBF1Q92538 1859 aa12□□□□□ -0.49
SREBF1-209ENST00000470247 ATP2C2O75185 946 aa12□□□□□ -0.49
SREBF1-209ENST00000470247 CLSTN1O94985 981 aa12□□□□□ -0.49
SREBF1-209ENST00000470247 RB1P06400 928 aa12□□□□□ -0.49
SREBF1-209ENST00000470247 PLEKP08567 350 aaPredicted RBP12□□□□□ -0.49
SREBF1-209ENST00000470247 SKILP12757 684 aa12□□□□□ -0.49
SREBF1-209ENST00000470247 KRT5P13647 590 aa12□□□□□ -0.49
SREBF1-209ENST00000470247 CHRNB2P17787 502 aa12□□□□□ -0.49
SREBF1-209ENST00000470247 ACAT1P24752 427 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms