RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 EML5Q05BV3 1969 aa13.12□□□□□ -0.31
LSM2-209ENST00000470083 A0A087WWV3 80 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 OR4Q2P0C623 313 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 ENGP17813 658 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 MARCKSP29966 332 aaPredicted RBP13.11□□□□□ -0.31
LSM2-209ENST00000470083 GALK1P51570 392 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 EFNA5P52803 228 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 EVCP57679 992 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 GPR17Q13304 367 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 TRIM68Q6AZZ1 485 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 CENPPQ6IPU0 288 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 ITIH5Q86UX2 942 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 RASSF3Q86WH2 238 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 ABCA7Q8IZY2 2146 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 CEP120Q8N960 986 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 C18orf25Q96B23 403 aaPredicted RBP13.11□□□□□ -0.31
LSM2-209ENST00000470083 CNOT6LQ96LI5 555 aaKnown RBP13.11□□□□□ -0.31
LSM2-209ENST00000470083 AIFM3Q96NN9 605 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 TPSD1Q9BZJ3 242 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 SMG9Q9H0W8 520 aaKnown RBP13.11□□□□□ -0.31
LSM2-209ENST00000470083 CCDC86Q9H6F5 360 aaKnown RBP13.11□□□□□ -0.31
LSM2-209ENST00000470083 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 CNTN3Q9P232 1028 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 ZMYM5Q9UJ78 669 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 TBX20Q9UMR3 447 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 PCDHA12Q9UN75 941 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 TNFSF13BQ9Y275 285 aa13.11□□□□□ -0.31
LSM2-209ENST00000470083 OR6C75A6NL08 312 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 TNFRSF10BO14763 440 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 ARSAP15289 507 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 CDC25CP30307 473 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 FAM193AP78312 1265 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 CYP4F8P98187 520 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 PPP2R5AQ15172 486 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 NAIF1Q69YI7 327 aaPredicted RBP13.1□□□□□ -0.31
LSM2-209ENST00000470083 BLOC1S2Q6QNY1 142 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 PIK3AP1Q6ZUJ8 805 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 SYT12Q8IV01 421 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 HDDC3Q8N4P3 179 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 ATAD1Q8NBU5 361 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 HNRNPLLQ8WVV9 542 aaKnown RBP13.1□□□□□ -0.31
LSM2-209ENST00000470083 EZH1Q92800 747 aaPredicted RBP13.1□□□□□ -0.31
LSM2-209ENST00000470083 JAKMIP1Q96N16 626 aaKnown RBP13.1□□□□□ -0.31
LSM2-209ENST00000470083 GCNAQ96QF7 691 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 KIFC3Q9BVG8 833 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 SLC46A2Q9BY10 475 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 CDT1Q9H211 546 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 KCNJ14Q9UNX9 436 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 SLC27A5Q9Y2P5 690 aa13.1□□□□□ -0.31
LSM2-209ENST00000470083 MTMR11A4FU01 709 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 M0QZQ0 153 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 U2AF2P26368 475 aaKnown RBP eCLIP13.09□□□□□ -0.31
LSM2-209ENST00000470083 GJA4P35212 333 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 DPP6P42658 865 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 OSTNP61366 133 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 HNRNPDQ14103 355 aaKnown RBP13.09□□□□□ -0.31
LSM2-209ENST00000470083 ANO7Q6IWH7 933 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 SLC23A3Q6PIS1 610 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 LPCAT2Q7L5N7 544 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 CMTM8Q8IZV2 173 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 TTC9BQ8N6N2 239 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 CCDC26Q8TAB7 109 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 LRIG1Q96JA1 1093 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 IL21Q9HBE4 155 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 HSFX1Q9UBD0 423 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 CCL26Q9Y258 94 aa13.09□□□□□ -0.31
LSM2-209ENST00000470083 CPLX1O14810 134 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 SOAT2O75908 522 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 CYP11B2P19099 503 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 RPS6KB1P23443 525 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 HOXD12P35452 270 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 AVPR1AP37288 418 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 ATXN3P54252 364 aaPredicted RBP13.08□□□□□ -0.32
LSM2-209ENST00000470083 C19orf57Q0VDD7 668 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 MYBPC2Q14324 1141 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 PDGFRLQ15198 375 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 ZNF568Q3ZCX4 644 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 CC2D1AQ6P1N0 951 aaPredicted RBP13.08□□□□□ -0.32
LSM2-209ENST00000470083 CCNI2Q6ZMN8 369 aaPredicted RBP13.08□□□□□ -0.32
LSM2-209ENST00000470083 USP37Q86T82 979 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 MDGA1Q8NFP4 955 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 OLIG1Q8TAK6 271 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 ADAMTS14Q8WXS8 1223 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 KCNB2Q92953 911 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 USP13Q92995 863 aaPredicted RBP13.08□□□□□ -0.32
LSM2-209ENST00000470083 CD101Q93033 1021 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 ACAP3Q96P50 834 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 NACC1Q96RE7 527 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 TTC12Q9H892 705 aaPredicted RBP13.08□□□□□ -0.32
LSM2-209ENST00000470083 KIF9Q9HAQ2 790 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 PTPRHQ9HD43 1115 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 TMEM74BQ9NUR3 256 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 MBD1Q9UIS9 605 aaPredicted RBP13.08□□□□□ -0.32
LSM2-209ENST00000470083 RAXQ9Y2V3 346 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 TIMM13Q9Y5L4 95 aaPredicted RBP13.08□□□□□ -0.32
LSM2-209ENST00000470083 NUP205Q92621 2012 aa13.08□□□□□ -0.32
LSM2-209ENST00000470083 NUP210Q8TEM1 1887 aaPredicted RBP13.08□□□□□ -0.32
LSM2-209ENST00000470083 LARGE1O95461 756 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 SPATA31C1P0DKV0 1188 aa13.07□□□□□ -0.32
LSM2-209ENST00000470083 PTGER3P43115 390 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms