RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 HIDE1A8MVS5 230 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 C2CD2LO14523 706 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 TEX28O15482 410 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 IGFBP6P24592 240 aaPredicted RBP13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 GNL1P36915 607 aaPredicted RBP13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 NOP14P78316 857 aaKnown RBP13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 TSPY1Q01534 308 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 NFE2Q16621 373 aaPredicted RBP13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 EXOC3L4Q17RC7 722 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 UVSSAQ2YD98 709 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 FILIP1LQ4L180 1135 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 WSCD1Q658N2 575 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 CYP26C1Q6V0L0 522 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 DCP1BQ8IZD4 617 aaKnown RBP13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 ADGRF2Q8IZF7 708 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 NT5C1BQ96P26 610 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 CLSTN3Q9BQT9 956 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 BCO2Q9BYV7 579 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 SNX25Q9H3E2 840 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 MMRN2Q9H8L6 949 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 DZANK1Q9NVP4 752 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 FBXL5Q9UKA1 691 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 L1RE1Q9UN81 338 aa13.52□□□□□ -0.25
SPTLC1-204ENST00000469778 CLASP2O75122 1294 aaKnown RBP13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 ABLIM3O94929 683 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 HOXB8P17481 243 aaPredicted RBP13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 RFX1P22670 979 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 OR1D2P34982 312 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 CA8P35219 290 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 GCNT1Q02742 428 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 GPR17Q13304 367 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 KRT31Q15323 416 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 TCEAL5Q5H9L2 206 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 MIIPQ5JXC2 388 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 LILRA6Q6PI73 481 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 LMO3Q8TAP4 145 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 SLC22A17Q8WUG5 538 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 CASP10Q92851 521 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 SEMA4DQ92854 862 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 TNIP3Q96KP6 325 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 HSD3B7Q9H2F3 369 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 CDH9Q9ULB4 789 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 COG5Q9UP83 839 aa13.51□□□□□ -0.25
SPTLC1-204ENST00000469778 LGALS16A8MUM7 142 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 CLSTN1O94985 981 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 GLUD1P00367 558 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 ATF2P15336 505 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 ASPAP45381 313 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 NRIP1P48552 1158 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 CLCN4P51793 760 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 INCA1Q0VD86 236 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 ADAM15Q13444 863 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 KCNC3Q14003 757 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 CTC1Q2NKJ3 1217 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 TRIM65Q6PJ69 517 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 PRSS55Q6UWB4 352 aaPredicted RBP13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 CCDC149Q6ZUS6 474 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 CRYBG2Q8N1P7 616 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 AUTS2Q8WXX7 1259 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 PABPC5Q96DU9 382 aaKnown RBP13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 FAM84AQ96KN4 292 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 B3GALT6Q96L58 329 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 CEP295NLQ96MC4 621 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 RHOBTB2Q9BYZ6 727 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 ZCWPW1Q9H0M4 648 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 ABCB6Q9NP58 842 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 DDX43Q9NXZ2 648 aaKnown RBP13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 GCNT4Q9P109 453 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 AFF4Q9UHB7 1163 aaKnown RBP13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 KIAA1257Q9ULG3 409 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 BARX2Q9UMQ3 279 aaPredicted RBP13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 TIMM13Q9Y5L4 95 aaPredicted RBP13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 CDY1Q9Y6F8 540 aa13.5□□□□□ -0.25
SPTLC1-204ENST00000469778 SCN1AP35498 2009 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 PLXNA4Q9HCM2 1894 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 PAPLNO95428 1278 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 TPM3P06753 285 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 PON1P27169 355 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 ELF1P32519 619 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 TUFMP49411 452 aaKnown RBP13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 COPB1P53618 953 aaKnown RBP13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 MFAP3P55082 362 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 HYAL1Q12794 435 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 CUL2Q13617 745 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 INTS6LQ5JSJ4 861 aaKnown RBP13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 FAM171BQ6P995 826 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 LUZP1Q86V48 1076 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 TCEAL8Q8IYN2 117 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 OR6B3Q8NGW1 331 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 KBTBD7Q8WVZ9 684 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 FUBP3Q96I24 572 aaKnown RBP eCLIP13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 PI4K2AQ9BTU6 479 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 INTS2Q9H0H0 1204 aaKnown RBP13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 VPS16Q9H269 839 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 PLCB1Q9NQ66 1216 aa13.49□□□□□ -0.25
SPTLC1-204ENST00000469778 A8MXQ7 604 aa13.48□□□□□ -0.25
SPTLC1-204ENST00000469778 PES1O00541 588 aaKnown RBP13.48□□□□□ -0.25
SPTLC1-204ENST00000469778 TGM5O43548 720 aa13.48□□□□□ -0.25
SPTLC1-204ENST00000469778 SERPINC1P01008 464 aa13.48□□□□□ -0.25
SPTLC1-204ENST00000469778 POU2F2P09086 479 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms