RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 DNALI1O14645 258 aaPredicted RBP12.76□□□□□ -0.37
VARS2-205ENST00000469358 BRD2P25440 801 aaKnown RBP12.76□□□□□ -0.37
VARS2-205ENST00000469358 MAN1A1P33908 653 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 CAV1Q03135 178 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 PTP4A2Q12974 167 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 SPARCL1Q14515 664 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 HHATQ5VTY9 493 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 RFX8Q6ZV50 586 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 KATNAL2Q8IYT4 538 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 PTPRN2Q92932 1015 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 THSD7AQ9UPZ6 1657 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 EDF1O60869 148 aaKnown RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 LYPLA2O95372 231 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 C4BPAP04003 597 aaKnown RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 ORC1Q13415 861 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 CUL2Q13617 745 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 ZACNQ401N2 412 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 FNBP1LQ5T0N5 605 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 LIN9Q5TKA1 542 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 SCARA5Q6ZMJ2 495 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 C15orf39Q6ZRI6 1047 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 OGFOD1Q8N543 542 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 MAB21L3Q8N8X9 362 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 MAIP1Q8WWC4 291 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 ZNF668Q96K58 619 aaPredicted RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 CFAP57Q96MR6 1250 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 NUDCD1Q96RS6 583 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 TARS2Q9BW92 718 aaKnown RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 ZWILCHQ9H900 591 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 ZNF277Q9NRM2 450 aaPredicted RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 A0A0G2JND7 137 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 CST3P01034 146 aaPredicted RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 GTF2H1P32780 548 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 HIRAP54198 1017 aaPredicted RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 FEZF2Q8TBJ5 459 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 LRRN4Q8WUT4 740 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 WDR83Q9BRX9 315 aaKnown RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 DENND2DQ9H6A0 471 aaPredicted RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 PXMP2Q9NR77 195 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 ENO4A6NNW6 628 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 MAP3K13O43283 966 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 PSTPIP1O43586 416 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 KIF1CO43896 1103 aaKnown RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 PEX10O60683 326 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 TUBP50607 506 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 MKRN3Q13064 507 aaKnown RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 EXD1Q8NHP7 514 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 C10orf82Q8WW14 230 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 ZNF75CPQ92670 426 aaPredicted RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 MOV10L1Q9BXT6 1211 aaKnown RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 METTL5Q9NRN9 209 aaKnown RBP12.75□□□□□ -0.37
VARS2-205ENST00000469358 KANSL3Q9P2N6 904 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 USH1CQ9Y6N9 552 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 CLUHO75153 1309 aa12.75□□□□□ -0.37
VARS2-205ENST00000469358 LRRIQ4A6NIV6 560 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 CD48P09326 243 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 GCKP35557 465 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 PLEKHA7Q6IQ23 1121 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 LRRC6Q86X45 466 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 ZNF606Q8WXB4 792 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 MIPEPQ99797 713 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 YIPF3Q9GZM5 350 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 FBXO6Q9NRD1 293 aaPredicted RBP12.74□□□□□ -0.37
VARS2-205ENST00000469358 TXLNGQ9NUQ3 528 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 RBAKQ9NYW8 714 aaPredicted RBP12.74□□□□□ -0.37
VARS2-205ENST00000469358 AGO2Q9UKV8 859 aaKnown RBP12.74□□□□□ -0.37
VARS2-205ENST00000469358 STARD13Q9Y3M8 1113 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 PCDHA10Q9Y5I2 948 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 CCDC189A1A4V9 331 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 RGS20O76081 388 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 STBD1O95210 358 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 WEE2P0C1S8 567 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 GLRA2P23416 452 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 PRKCEQ02156 737 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 PDK4Q16654 411 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 DCUN1D2Q6PH85 259 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 SPOCD1Q6ZMY3 1216 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 NLRP9Q7RTR0 991 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 CCDC125Q86Z20 511 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 ALLCQ8N6M5 410 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 TMEM174Q8WUU8 243 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 LRMDAQ9H2I8 198 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 CFAP69A5D8W1 941 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 TNFSF9P41273 254 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 YARSP54577 528 aaKnown RBP12.74□□□□□ -0.37
VARS2-205ENST00000469358 SLC8A3P57103 927 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 ACVR2BQ13705 512 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 TAF5Q15542 800 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 RNASEH2BQ5TBB1 312 aaKnown RBP12.74□□□□□ -0.37
VARS2-205ENST00000469358 ZBTB33Q86T24 672 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 RHPN2Q8IUC4 686 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 TCP10LQ8TDR4 215 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 NAF1Q96HR8 494 aaKnown RBP12.74□□□□□ -0.37
VARS2-205ENST00000469358 SENP7Q9BQF6 1050 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 FBXO40Q9UH90 709 aa12.74□□□□□ -0.37
VARS2-205ENST00000469358 TYROBPO43914 113 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 ZBED4O75132 1171 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 EGFRP00533 1210 aa12.73□□□□□ -0.37
VARS2-205ENST00000469358 FKBP1AP62942 108 aaKnown RBP12.73□□□□□ -0.37
VARS2-205ENST00000469358 MTMR2Q13614 643 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms