RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 CPLX3Q8WVH0 158 aa8.73□□□□□ -1.01
NPHP3-204ENST00000469232 CHP1Q99653 195 aa8.73□□□□□ -1.01
NPHP3-204ENST00000469232 BAG1Q99933 345 aaPredicted RBP8.73□□□□□ -1.01
NPHP3-204ENST00000469232 GOLGA2P5Q9HBQ8 144 aa8.73□□□□□ -1.01
NPHP3-204ENST00000469232 PRDM5Q9NQX1 630 aaPredicted RBP8.73□□□□□ -1.01
NPHP3-204ENST00000469232 NOCTQ9UK39 431 aaKnown RBP8.73□□□□□ -1.01
NPHP3-204ENST00000469232 PODXLO00592 558 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 FGBP02675 491 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 AMHP03971 560 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 PAEPP09466 180 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 LINC00271P0C7V0 271 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 CCDC172P0C7W6 258 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 WARSP23381 471 aaKnown RBP8.72□□□□□ -1.01
NPHP3-204ENST00000469232 IGFBP6P24592 240 aaPredicted RBP8.72□□□□□ -1.01
NPHP3-204ENST00000469232 CLCNKBP51801 687 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 BPIFB4P59827 614 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 SOWAHAQ2M3V2 549 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 WDR72Q3MJ13 1102 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 CYP26C1Q6V0L0 522 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 ZNF365Q70YC5 407 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 UNC93AQ86WB7 457 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 ZNF280BQ86YH2 543 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 CMTR2Q8IYT2 770 aaKnown RBP8.72□□□□□ -1.01
NPHP3-204ENST00000469232 RNF168Q8IYW5 571 aaPredicted RBP8.72□□□□□ -1.01
NPHP3-204ENST00000469232 C7orf61Q8IZ16 206 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 CRYBG2Q8N1P7 616 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 LRRC43Q8N309 656 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 EPS8L1Q8TE68 723 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 KBTBD7Q8WVZ9 684 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 SUSD3Q96L08 255 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 SPAG5Q96R06 1193 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 PAAF1Q9BRP4 392 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 CWH43Q9H720 699 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 NRDE2Q9H7Z3 1164 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 CISHQ9NSE2 258 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 PRKAG2Q9UGJ0 569 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 BARX2Q9UMQ3 279 aaPredicted RBP8.72□□□□□ -1.01
NPHP3-204ENST00000469232 POLIQ9UNA4 740 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 NME7Q9Y5B8 376 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 POMCP01189 267 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 GALTP07902 379 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 KRT19P08727 400 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 ACRP10323 421 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 SKILP12757 684 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 CHRNB2P17787 502 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 TYMPP19971 482 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 GATMP50440 423 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 RAD23BP54727 409 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 DEFB103AP81534 67 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 RAPGEF1Q13905 1077 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 ASIC2Q16515 512 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 ARHGAP44Q17R89 818 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 RAD9BQ6WBX8 426 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 ZNF662Q6ZS27 426 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 ZNF571Q7Z3V5 609 aaPredicted RBP8.72□□□□□ -1.01
NPHP3-204ENST00000469232 ZNF677Q86XU0 584 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 GPR65Q8IYL9 337 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 TMEM86AQ8N2M4 240 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 RNF169Q8NCN4 708 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 ELMO3Q96BJ8 720 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.72□□□□□ -1.014e-6■□□□□ 9.4
NPHP3-204ENST00000469232 SMYD3Q9H7B4 428 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 MARCH5Q9NX47 278 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 KIAA1257Q9ULG3 409 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 LRFN2Q9ULH4 789 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 L1RE1Q9UN81 338 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.72□□□□□ -1.01
NPHP3-204ENST00000469232 TSC2P49815 1807 aa8.72□□□□□ -1.01
NPHP3-204ENST00000469232 EIF3CLB5ME19 914 aaKnown RBP8.71□□□□□ -1.02
NPHP3-204ENST00000469232 CYP26A1O43174 497 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 GJB5O95377 273 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 PTMAP06454 111 aaKnown RBP8.71□□□□□ -1.02
NPHP3-204ENST00000469232 WEE2P0C1S8 567 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 PNMA6AP0CW24 399 aaPredicted RBP8.71□□□□□ -1.02
NPHP3-204ENST00000469232 CYP11B1P15538 503 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 CDH5P33151 784 aaPredicted RBP8.71□□□□□ -1.02
NPHP3-204ENST00000469232 EIF4A3P38919 411 aaKnown RBP8.71□□□□□ -1.02
NPHP3-204ENST00000469232 RGS19P49795 217 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 TNNC1P63316 161 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 PTK2Q05397 1052 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 MRPL58Q14197 206 aaKnown RBP8.71□□□□□ -1.02
NPHP3-204ENST00000469232 BMS1Q14692 1282 aaKnown RBP8.71□□□□□ -1.02
NPHP3-204ENST00000469232 TIGD5Q53EQ6 642 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 PDCL2Q8N4E4 241 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 SLC4A11Q8NBS3 891 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 RBBP8NLQ8NC74 664 aaPredicted RBP8.71□□□□□ -1.02
NPHP3-204ENST00000469232 KIAA1524Q8TCG1 905 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 SENP8Q96LD8 212 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 SLC9A7Q96T83 725 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 EIF3CQ99613 913 aaKnown RBP8.71□□□□□ -1.02
NPHP3-204ENST00000469232 ZSWIM1Q9BR11 485 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 HAUS4Q9H6D7 363 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 NHEJ1Q9H9Q4 299 aaPredicted RBP8.71□□□□□ -1.02
NPHP3-204ENST00000469232 ZNHIT6Q9NWK9 470 aaKnown RBP8.71□□□□□ -1.02
NPHP3-204ENST00000469232 PCDHGC3Q9UN70 934 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 INPP5FQ9Y2H2 1132 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 ZKSCAN5Q9Y2L8 839 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 REXO2Q9Y3B8 237 aaKnown RBP8.71□□□□□ -1.02
NPHP3-204ENST00000469232 SNX9Q9Y5X1 595 aa8.71□□□□□ -1.02
NPHP3-204ENST00000469232 EPN1Q9Y6I3 576 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms