RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 C15orf39Q6ZRI6 1047 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 ANKS3Q6ZW76 656 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 LIMS2Q7Z4I7 341 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 FRMD5Q7Z6J6 570 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 FILIP1Q7Z7B0 1213 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 PPFIBP1Q86W92 1011 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 CBWD2Q8IUF1 395 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 NELFCDQ8IXH7 590 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 CCDC116Q8IYX3 515 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 CSGALNACT2Q8N6G5 542 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 TOP6BLQ8N6T0 577 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 MRPL43Q8N983 215 aaKnown RBP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 APPL2Q8NEU8 664 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 CXorf38Q8TB03 319 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 SPPL3Q8TCT6 385 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 NOC3LQ8WTT2 800 aaKnown RBP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 HDAC7Q8WUI4 952 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 ARNTL2Q8WYA1 636 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 PIK3R5Q8WYR1 880 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 SAAL1Q96ER3 474 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 BORCS6Q96GS4 357 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 SUSD3Q96L08 255 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 ZNF560Q96MR9 790 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 GUCD1Q96NT3 240 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 FNBP1Q96RU3 617 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 CDX2Q99626 313 aaPredicted RBP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 CGRRF1Q99675 332 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 C17orf80Q9BSJ5 609 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 HERC2P3Q9BVR0 1158 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 APOL6Q9BWW8 343 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 NAT10Q9H0A0 1025 aaKnown RBP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 GZF1Q9H116 711 aaPredicted RBP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 ZBP1Q9H171 429 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 NSUN3Q9H649 340 aaKnown RBP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 RXFP1Q9HBX9 757 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 PDE11AQ9HCR9 933 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 MRPL17Q9NRX2 175 aaKnown RBP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 INTS13Q9NVM9 706 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 ANO10Q9NW15 660 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 MARCH5Q9NX47 278 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 MIOSQ9NXC5 875 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 GDAP2Q9NXN4 497 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 HSFX1Q9UBD0 423 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 DNAJB4Q9UDY4 337 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 DSEQ9UL01 958 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 USP20Q9Y2K6 914 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 COQ4Q9Y3A0 265 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 BACE2Q9Y5Z0 518 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 NOTCH4Q99466 2003 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 ZNF638Q14966 1978 aaKnown RBP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 OBSL1O75147 1896 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 KIF26AQ9ULI4 1882 aaPredicted RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 PATJQ8NI35 1801 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 GTPBP10A4D1E9 387 aaKnown RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 SLC35F4A4IF30 521 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 C2orf71A6NGG8 1288 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 EPOPA6NHQ4 379 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 CASTOR2A6NHX0 329 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 LRRC10BA6NIK2 292 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 KPNA7A9QM74 516 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 H7C4K7 107 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 GRM6O15303 877 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TBC1D4O60343 1298 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TACC1O75410 805 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TADA2AO75478 443 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TNNC2P02585 160 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 URODP06132 367 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 ADH1AP07327 375 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 POU2F2P09086 479 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TMEM191BP0C7N4 346 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 SRGAP2BP0DMP2 458 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 CCDC192P0DO97 292 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 ODC1P11926 461 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 HARSP12081 509 aaKnown RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 BMP2P12643 396 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 KRT13P13646 458 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 FOSL2P15408 326 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 HOXB8P17481 243 aaPredicted RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TNNI1P19237 187 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 EEF1GP26641 437 aaKnown RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 HOXA9P31269 272 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 OR1G1P47890 313 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 NDUFV1P49821 464 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TAF6P49848 677 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 CYP2J2P51589 502 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 CLCNKBP51801 687 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 VAMP7P51809 220 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 PMS1P54277 932 aaKnown RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 NLRP12P59046 1061 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 LILRA4P59901 499 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TFAMQ00059 246 aaKnown RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 SPAG1Q07617 926 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 CETN1Q12798 172 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 MYO1EQ12965 1108 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 KCNC3Q14003 757 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 MRPL58Q14197 206 aaKnown RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 ADGRE1Q14246 886 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 ARID5BQ14865 1188 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 PTPN14Q15678 1187 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 QPCTQ16769 361 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms