RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SLITRK6Q9H5Y7 841 aa26.47■■□□□ 1.83
PTCH1-210ENST00000468211 SEL1LQ9UBV2 794 aa26.47■■□□□ 1.83
PTCH1-210ENST00000468211 NDRG2Q9UN36 371 aaKnown RBP26.47■■□□□ 1.83
PTCH1-210ENST00000468211 KIF26AQ9ULI4 1882 aaPredicted RBP26.47■■□□□ 1.83
PTCH1-210ENST00000468211 DMXL1Q9Y485 3027 aa26.47■■□□□ 1.83
PTCH1-210ENST00000468211 GAP43P17677 238 aa26.46■■□□□ 1.83
PTCH1-210ENST00000468211 TAF6P49848 677 aa26.46■■□□□ 1.83
PTCH1-210ENST00000468211 CSTF1Q05048 431 aaKnown RBP26.46■■□□□ 1.83
PTCH1-210ENST00000468211 SLC39A12Q504Y0 691 aa26.46■■□□□ 1.83
PTCH1-210ENST00000468211 L1TD1Q5T7N2 865 aaKnown RBP26.46■■□□□ 1.83
PTCH1-210ENST00000468211 WSCD1Q658N2 575 aa26.46■■□□□ 1.83
PTCH1-210ENST00000468211 MFSD6LQ8IWD5 586 aa26.46■■□□□ 1.83
PTCH1-210ENST00000468211 IRF7Q92985 503 aa26.46■■□□□ 1.83
PTCH1-210ENST00000468211 PSMG2Q969U7 264 aa26.46■■□□□ 1.83
PTCH1-210ENST00000468211 SAAL1Q96ER3 474 aa26.46■■□□□ 1.83
PTCH1-210ENST00000468211 INTS4Q96HW7 963 aaKnown RBP26.46■■□□□ 1.83
PTCH1-210ENST00000468211 LPIN3Q9BQK8 851 aa26.46■■□□□ 1.83
PTCH1-210ENST00000468211 FAM213AQ9BRX8 229 aa26.46■■□□□ 1.83
PTCH1-210ENST00000468211 FBXO4Q9UKT5 387 aa26.46■■□□□ 1.83
PTCH1-210ENST00000468211 GPR179Q6PRD1 2367 aa26.45■■□□□ 1.82
PTCH1-210ENST00000468211 ARNTLO00327 626 aa26.45■■□□□ 1.82
PTCH1-210ENST00000468211 GCNT3O95395 438 aa26.45■■□□□ 1.82
PTCH1-210ENST00000468211 ATF6P18850 670 aa26.45■■□□□ 1.82
PTCH1-210ENST00000468211 TXLNAP40222 546 aa26.45■■□□□ 1.82
PTCH1-210ENST00000468211 MAGEA9P43362 315 aa26.45■■□□□ 1.82
PTCH1-210ENST00000468211 RPS9P46781 194 aaKnown RBP26.45■■□□□ 1.82
PTCH1-210ENST00000468211 POU5F1Q01860 360 aaKnown RBP26.45■■□□□ 1.82
PTCH1-210ENST00000468211 POSTNQ15063 836 aa26.45■■□□□ 1.82
PTCH1-210ENST00000468211 ZC3H14Q6PJT7 736 aaKnown RBP26.45■■□□□ 1.82
PTCH1-210ENST00000468211 DEPDC1BQ8WUY9 529 aa26.45■■□□□ 1.82
PTCH1-210ENST00000468211 LRRC3BQ96PB8 259 aa26.45■■□□□ 1.82
PTCH1-210ENST00000468211 ACCSQ96QU6 501 aa26.45■■□□□ 1.82
PTCH1-210ENST00000468211 GPR88Q9GZN0 384 aa26.45■■□□□ 1.82
PTCH1-210ENST00000468211 TRPV5Q9NQA5 729 aa26.45■■□□□ 1.82
PTCH1-210ENST00000468211 FRMD3A2A2Y4 597 aa26.44■■□□□ 1.82
PTCH1-210ENST00000468211 IDEP14735 1019 aa26.44■■□□□ 1.82
PTCH1-210ENST00000468211 STAT6P42226 847 aa26.44■■□□□ 1.82
PTCH1-210ENST00000468211 ZNF528Q3MIS6 628 aa26.44■■□□□ 1.82
PTCH1-210ENST00000468211 TSSK4Q6SA08 328 aa26.44■■□□□ 1.82
PTCH1-210ENST00000468211 SUMF1Q8NBK3 374 aa26.44■■□□□ 1.82
PTCH1-210ENST00000468211 SEPT5Q99719 369 aaPredicted RBP26.44■■□□□ 1.82
PTCH1-210ENST00000468211 OLFML3Q9NRN5 406 aa26.44■■□□□ 1.82
PTCH1-210ENST00000468211 HSFX1Q9UBD0 423 aa26.44■■□□□ 1.82
PTCH1-210ENST00000468211 DSEQ9UL01 958 aa26.44■■□□□ 1.82
PTCH1-210ENST00000468211 MRPS17Q9Y2R5 130 aaKnown RBP26.44■■□□□ 1.82
PTCH1-210ENST00000468211 ASB3Q9Y575 518 aa26.44■■□□□ 1.82
PTCH1-210ENST00000468211 PIAS3Q9Y6X2 628 aa26.44■■□□□ 1.82
PTCH1-210ENST00000468211 MORC2Q9Y6X9 1032 aaPredicted RBP26.44■■□□□ 1.82
PTCH1-210ENST00000468211 OBSL1O75147 1896 aa26.44■■□□□ 1.82
PTCH1-210ENST00000468211 ZNF263O14978 683 aa26.43■■□□□ 1.82
PTCH1-210ENST00000468211 NCAM2O15394 837 aa26.43■■□□□ 1.82
PTCH1-210ENST00000468211 IL18RAPO95256 599 aa26.43■■□□□ 1.82
PTCH1-210ENST00000468211 GABRR2P28476 465 aa26.43■■□□□ 1.82
PTCH1-210ENST00000468211 MTAPQ13126 283 aa26.43■■□□□ 1.82
PTCH1-210ENST00000468211 CCDC73Q6ZRK6 1079 aa26.43■■□□□ 1.82
PTCH1-210ENST00000468211 ARID3BQ8IVW6 561 aaPredicted RBP26.43■■□□□ 1.82
PTCH1-210ENST00000468211 PDILTQ8N807 584 aa26.43■■□□□ 1.82
PTCH1-210ENST00000468211 BACH2Q9BYV9 841 aa26.43■■□□□ 1.82
PTCH1-210ENST00000468211 ATXN3LQ9H3M9 355 aa26.43■■□□□ 1.82
PTCH1-210ENST00000468211 EXOC7Q9UPT5 735 aa26.43■■□□□ 1.82
PTCH1-210ENST00000468211 GOLGA8IPA6NC78 632 aa26.42■■□□□ 1.82
PTCH1-210ENST00000468211 GOLGA8JA6NMD2 632 aa26.42■■□□□ 1.82
PTCH1-210ENST00000468211 KPNA7A9QM74 516 aa26.42■■□□□ 1.82
PTCH1-210ENST00000468211 TULP1O00294 542 aaPredicted RBP26.42■■□□□ 1.82
PTCH1-210ENST00000468211 MAN2B1O00754 1011 aa26.42■■□□□ 1.82
PTCH1-210ENST00000468211 METTL23Q86XA0 190 aa26.42■■□□□ 1.82
PTCH1-210ENST00000468211 BRSK2Q8IWQ3 736 aa26.42■■□□□ 1.82
PTCH1-210ENST00000468211 DCLK2Q8N568 766 aa26.42■■□□□ 1.82
PTCH1-210ENST00000468211 FAM3CQ92520 227 aa26.42■■□□□ 1.82
PTCH1-210ENST00000468211 CBWD1Q9BRT8 395 aa26.42■■□□□ 1.82
PTCH1-210ENST00000468211 IL21Q9HBE4 155 aa26.42■■□□□ 1.82
PTCH1-210ENST00000468211 PANK4Q9NVE7 773 aa26.42■■□□□ 1.82
PTCH1-210ENST00000468211 ZNF638Q14966 1978 aaKnown RBP26.42■■□□□ 1.82
PTCH1-210ENST00000468211 STX6O43752 255 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 NASPP49321 788 aaPredicted RBP26.41■■□□□ 1.82
PTCH1-210ENST00000468211 CYP4F8P98187 520 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 TFAMQ00059 246 aaKnown RBP26.41■■□□□ 1.82
PTCH1-210ENST00000468211 FCHO2Q0JRZ9 810 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 MGAT5BQ3V5L5 792 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 GPR158Q5T848 1215 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 NT5DC4Q86YG4 428 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 THEM5Q8N1Q8 247 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 C1orf127Q8N9H9 656 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 GLIS3Q8NEA6 775 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 CXorf38Q8TB03 319 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 FAM200AQ8TCP9 573 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 GIPC2Q8TF65 315 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 NELL1Q92832 810 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 TMLHEQ9NVH6 421 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 PCDHB13Q9Y5F0 798 aa26.41■■□□□ 1.82
PTCH1-210ENST00000468211 PRPF6O94906 941 aaKnown RBP26.4■■□□□ 1.82
PTCH1-210ENST00000468211 POLR2BP30876 1174 aaKnown RBP26.4■■□□□ 1.82
PTCH1-210ENST00000468211 SOX9P48436 509 aa26.4■■□□□ 1.82
PTCH1-210ENST00000468211 TUFMP49411 452 aaKnown RBP26.4■■□□□ 1.82
PTCH1-210ENST00000468211 SV2CQ496J9 727 aa26.4■■□□□ 1.82
PTCH1-210ENST00000468211 ITIH5Q86UX2 942 aa26.4■■□□□ 1.82
PTCH1-210ENST00000468211 SYCP3Q8IZU3 236 aa26.4■■□□□ 1.82
PTCH1-210ENST00000468211 HPS3Q969F9 1004 aa26.4■■□□□ 1.82
PTCH1-210ENST00000468211 E2F7Q96AV8 911 aa26.4■■□□□ 1.82
PTCH1-210ENST00000468211 CHRDQ9H2X0 955 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms