RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 CYP24A1Q07973 514 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 DPYDQ12882 1025 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 PSMD6Q15008 389 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 SURF1Q15526 300 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 IQCEQ6IPM2 695 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 NPAS3Q8IXF0 933 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 ELMOD1Q8N336 334 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 PDCL2Q8N4E4 241 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 FGF14Q92915 247 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 FNBP1Q96RU3 617 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 ZCWPW1Q9H0M4 648 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 MAFFQ9ULX9 164 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 L1RE1Q9UN81 338 aa12.43□□□□□ -0.42
CDHR3-205ENST00000468143 R3HCC1Q9Y3T6 440 aaKnown RBP12.43□□□□□ -0.42
CDHR3-205ENST00000468143 HCRTO43612 131 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 MYL1P05976 194 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 CEBPBP17676 345 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 ACAT1P24752 427 aaKnown RBP12.42□□□□□ -0.42
CDHR3-205ENST00000468143 ALDH1A3P47895 512 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 VCPP55072 806 aaKnown RBP12.42□□□□□ -0.42
CDHR3-205ENST00000468143 HTR4Q13639 388 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 PRSS36Q5K4E3 855 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 IER5LQ5T953 404 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 CYP4A22Q5TCH4 519 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 PDZD4Q76G19 769 aaPredicted RBP12.42□□□□□ -0.42
CDHR3-205ENST00000468143 TRAPPC11Q7Z392 1133 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 OSTM1Q86WC4 334 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 WDR49Q8IV35 697 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 SUGP1Q8IWZ8 645 aaKnown RBP12.42□□□□□ -0.42
CDHR3-205ENST00000468143 C12orf56Q8IXR9 622 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 FBXL6Q8N531 539 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 LRRC52Q8N7C0 313 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 PLEKHO2Q8TD55 490 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 ZNF516Q92618 1163 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 CCDC47Q96A33 483 aaKnown RBP12.42□□□□□ -0.42
CDHR3-205ENST00000468143 HPDLQ96IR7 371 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 SEPT5Q99719 369 aaPredicted RBP12.42□□□□□ -0.42
CDHR3-205ENST00000468143 KXD1Q9BQD3 176 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 KCTD10Q9H3F6 313 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 TMLHEQ9NVH6 421 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 DDX43Q9NXZ2 648 aaKnown RBP12.42□□□□□ -0.42
CDHR3-205ENST00000468143 FBXL21Q9UKT6 434 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 DUSP12Q9UNI6 340 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 ZFP37Q9Y6Q3 630 aaPredicted RBP12.42□□□□□ -0.42
CDHR3-205ENST00000468143 NCOR1O75376 2440 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 DENND4AQ7Z401 1863 aa12.42□□□□□ -0.42
CDHR3-205ENST00000468143 MTCL1Q9Y4B5 1905 aaKnown RBP12.41□□□□□ -0.42
CDHR3-205ENST00000468143 RHOBTB3O94955 611 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 EPHB3P54753 998 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 GPC5P78333 572 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 MYO1EQ12965 1108 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 PNOCQ13519 176 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 SOWAHAQ2M3V2 549 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 MGAT5BQ3V5L5 792 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 FMR1NBQ8N0W7 255 aaPredicted RBP12.41□□□□□ -0.42
CDHR3-205ENST00000468143 SIX5Q8N196 739 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 FLCNQ8NFG4 579 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 FAM200AQ8TCP9 573 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 GPR152Q8TDT2 470 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 GIPC2Q8TF65 315 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 ERCC4Q92889 916 aaPredicted RBP12.41□□□□□ -0.42
CDHR3-205ENST00000468143 NXPE3Q969Y0 559 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 ELMO3Q96BJ8 720 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 ZSWIM3Q96MP5 696 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 CGRRF1Q99675 332 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 LPIN3Q9BQK8 851 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 PI4K2AQ9BTU6 479 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 GZF1Q9H116 711 aaPredicted RBP12.41□□□□□ -0.42
CDHR3-205ENST00000468143 DNAJC25Q9H1X3 360 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 MFSD1Q9H3U5 465 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 DMAC2Q9NW81 257 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 GDAP2Q9NXN4 497 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 ABI2Q9NYB9 513 aaPredicted RBP12.41□□□□□ -0.42
CDHR3-205ENST00000468143 CGNQ9P2M7 1197 aaKnown RBP12.41□□□□□ -0.42
CDHR3-205ENST00000468143 CA14Q9ULX7 337 aa12.41□□□□□ -0.42
CDHR3-205ENST00000468143 ANK1P16157 1881 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 STK25O00506 426 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 PDXKO00764 312 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 ZNF197O14709 1029 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 PHACTR2O75167 634 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 MOSPD3O75425 235 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 NR3C1P04150 777 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 AVPR2P30518 371 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 GPR15P49685 360 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 DLG4P78352 724 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 SNW1Q13573 536 aaKnown RBP12.4□□□□□ -0.42
CDHR3-205ENST00000468143 CCDC142Q17RM4 750 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 CEP135Q66GS9 1140 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 DNAJB7Q7Z6W7 309 aaPredicted RBP12.4□□□□□ -0.42
CDHR3-205ENST00000468143 GPIHBP1Q8IV16 184 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 SMYD4Q8IYR2 804 aaPredicted RBP12.4□□□□□ -0.42
CDHR3-205ENST00000468143 DCP1BQ8IZD4 617 aaKnown RBP12.4□□□□□ -0.42
CDHR3-205ENST00000468143 ADGRF2Q8IZF7 708 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 GOLGA5Q8TBA6 731 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 MMS19Q96T76 1030 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 LRRC3Q9BY71 257 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 PLA2G2FQ9BZM2 168 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 ZNF334Q9HCZ1 680 aaPredicted RBP12.4□□□□□ -0.42
CDHR3-205ENST00000468143 AVENQ9NQS1 362 aaPredicted RBP12.4□□□□□ -0.42
CDHR3-205ENST00000468143 ASAH2Q9NR71 780 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms