RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 NLRC5Q86WI3 1866 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 TNRC18O15417 2968 aaPredicted RBP11.47□□□□□ -0.57
NUP188-204ENST00000467044 A8MXQ7 604 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 SYN3O14994 580 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 CYP26A1O43174 497 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 TACC1O75410 805 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 FGF18O76093 207 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 FAM163BP0C2L3 166 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 FERP16591 822 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 TYMPP19971 482 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 ACO1P21399 889 aaKnown RBP11.47□□□□□ -0.57
NUP188-204ENST00000467044 WARSP23381 471 aaKnown RBP11.47□□□□□ -0.57
NUP188-204ENST00000467044 BMPR1AP36894 532 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 LHX1P48742 406 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 GSDMDP57764 484 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 YWHAHQ04917 246 aaPredicted RBP11.47□□□□□ -0.57
NUP188-204ENST00000467044 ORC1Q13415 861 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 ARID5BQ14865 1188 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 RAB30Q15771 203 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 OVOS1Q6IE37 1185 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 KIAA1841Q6NSI8 718 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 TAS1R1Q7RTX1 841 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 OSTM1Q86WC4 334 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 THEM5Q8N1Q8 247 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 UBR7Q8N806 425 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 TC2NQ8N9U0 490 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 KLHL23Q8NBE8 558 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 RBBP8NLQ8NC74 664 aaPredicted RBP11.47□□□□□ -0.57
NUP188-204ENST00000467044 KBTBD7Q8WVZ9 684 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 PDLIM2Q96JY6 352 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 B3GALT6Q96L58 329 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 C17orf80Q9BSJ5 609 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 NT5C1AQ9BXI3 368 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 PBX4Q9BYU1 374 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 DNAI2Q9GZS0 605 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 NKX2-4Q9H2Z4 354 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 DDX43Q9NXZ2 648 aaKnown RBP11.47□□□□□ -0.57
NUP188-204ENST00000467044 PUF60Q9UHX1 559 aaKnown RBP11.47□□□□□ -0.57
NUP188-204ENST00000467044 MYO6Q9UM54 1294 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 YBX2Q9Y2T7 364 aaKnown RBP11.47□□□□□ -0.57
NUP188-204ENST00000467044 RWDD3Q9Y3V2 267 aa11.47□□□□□ -0.57
NUP188-204ENST00000467044 HCRTO43612 131 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 CILPO75339 1184 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 ARHGEF15O94989 841 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 CALCAP01258 141 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 CYP11A1P05108 521 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 LINC00271P0C7V0 271 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 CCDC172P0C7W6 258 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 SKILP12757 684 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 CD19P15391 556 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 ACAT1P24752 427 aaKnown RBP11.46□□□□□ -0.57
NUP188-204ENST00000467044 LMO2P25791 158 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 CA8P35219 290 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 CLCN1P35523 988 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 PTK2Q05397 1052 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 INCA1Q0VD86 236 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 USP41Q3LFD5 358 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 VARS2Q5ST30 1063 aaKnown RBP11.46□□□□□ -0.57
NUP188-204ENST00000467044 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.46□□□□□ -0.57
NUP188-204ENST00000467044 LIMS2Q7Z4I7 341 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 SPRED2Q7Z698 418 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 DDX53Q86TM3 631 aaKnown RBP11.46□□□□□ -0.57
NUP188-204ENST00000467044 UNC93AQ86WB7 457 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 FMNL3Q8IVF7 1028 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 FAM71AQ8IYT1 594 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 TMEM176AQ96HP8 235 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 HEXIM2Q96MH2 286 aaKnown RBP11.46□□□□□ -0.57
NUP188-204ENST00000467044 TWNKQ96RR1 684 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 TGS1Q96RS0 853 aaKnown RBP11.46□□□□□ -0.57
NUP188-204ENST00000467044 TTPALQ9BTX7 342 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 ELOVL4Q9GZR5 314 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 FAM124BQ9H5Z6 455 aaPredicted RBP11.46□□□□□ -0.57
NUP188-204ENST00000467044 ABHD10Q9NUJ1 306 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 HMGXB4Q9UGU5 601 aa11.46□□□□□ -0.57
NUP188-204ENST00000467044 VWA8A3KMH1 1905 aa11.46□□□□□ -0.58
NUP188-204ENST00000467044 C2CD2LO14523 706 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 GABRDO14764 452 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 CSPG5O95196 566 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 SOD2P04179 222 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 FGFR3P22607 806 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 RAD23BP54727 409 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 BPIFB4P59827 614 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 PSMC1P62191 440 aaKnown RBP11.45□□□□□ -0.58
NUP188-204ENST00000467044 PLCB3Q01970 1234 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 TAP1Q03518 808 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 KLHL30Q0D2K2 578 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 CTXN3Q4LDR2 81 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 TDRD12Q587J7 1177 aaKnown RBP11.45□□□□□ -0.58
NUP188-204ENST00000467044 RTP2Q5QGT7 225 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 E4F1Q66K89 784 aaPredicted RBP11.45□□□□□ -0.58
NUP188-204ENST00000467044 PPP2R2DQ66LE6 453 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 PRSS55Q6UWB4 352 aaPredicted RBP11.45□□□□□ -0.58
NUP188-204ENST00000467044 IRF2BP2Q7Z5L9 587 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 ACOT1Q86TX2 421 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 SLC47A2Q86VL8 602 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 VPS52Q8N1B4 723 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 SLC4A11Q8NBS3 891 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 SPATA18Q8TC71 538 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 WHAMMQ8TF30 809 aa11.45□□□□□ -0.58
NUP188-204ENST00000467044 RIN2Q8WYP3 895 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms