RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 TDRD12Q587J7 1177 aaKnown RBP18.38■□□□□ 0.53
PTPRU-206ENST00000465525 HGSNATQ68CP4 663 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 OSTM1Q86WC4 334 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 OR6B3Q8NGW1 331 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 WHAMMQ8TF30 809 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 SLC20A1Q8WUM9 679 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 SYN2Q92777 582 aaPredicted RBP18.38■□□□□ 0.53
PTPRU-206ENST00000465525 COLEC11Q9BWP8 271 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 ELOVL4Q9GZR5 314 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 AAASQ9NRG9 546 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 ARHGAP20Q9P2F6 1191 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 SOWAHDA6NJG2 315 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 CILPO75339 1184 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 PDGFRBP09619 1106 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 LAG3P18627 525 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 HNRNPH3P31942 346 aaKnown RBP18.38■□□□□ 0.53
PTPRU-206ENST00000465525 CDR1P51861 262 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 YWHAEP62258 255 aaKnown RBP18.38■□□□□ 0.53
PTPRU-206ENST00000465525 MTF1Q14872 753 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 MEA1Q16626 185 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 CLP1Q92989 425 aaKnown RBP18.38■□□□□ 0.53
PTPRU-206ENST00000465525 JAKMIP2Q96AA8 810 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 B3GALT6Q96L58 329 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 LPIN3Q9BQK8 851 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 HAUS4Q9H6D7 363 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 ADAM28Q9UKQ2 775 aa18.38■□□□□ 0.53
PTPRU-206ENST00000465525 TMEM189-UBE2V1I3L0A0 370 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 MYOGP15173 224 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 LMO2P25791 158 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 EIF4A3P38919 411 aaKnown RBP18.37■□□□□ 0.53
PTPRU-206ENST00000465525 PTK2Q05397 1052 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 RAB30Q15771 203 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 TAF3Q5VWG9 929 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 KCNT2Q6UVM3 1135 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 LIMS2Q7Z4I7 341 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 TOP6BLQ8N6T0 577 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 COLGALT1Q8NBJ5 622 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 FAXDC2Q96IV6 333 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 SUSD3Q96L08 255 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 PBX4Q9BYU1 374 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 GPR62Q9BZJ7 368 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 SNX25Q9H3E2 840 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 DPEP3Q9H4B8 488 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 PUF60Q9UHX1 559 aaKnown RBP18.37■□□□□ 0.53
PTPRU-206ENST00000465525 MSRAQ9UJ68 235 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 CNTN6Q9UQ52 1028 aa18.37■□□□□ 0.53
PTPRU-206ENST00000465525 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
PTPRU-206ENST00000465525 SERPING1P05155 500 aa18.36■□□□□ 0.53
PTPRU-206ENST00000465525 ODC1P11926 461 aa18.36■□□□□ 0.53
PTPRU-206ENST00000465525 PAX3P23760 479 aa18.36■□□□□ 0.53
PTPRU-206ENST00000465525 ACAT1P24752 427 aaKnown RBP18.36■□□□□ 0.53
PTPRU-206ENST00000465525 TKTP29401 623 aaKnown RBP18.36■□□□□ 0.53
PTPRU-206ENST00000465525 ZNF132P52740 706 aa18.36■□□□□ 0.53
PTPRU-206ENST00000465525 RAD23BP54727 409 aa18.36■□□□□ 0.53
PTPRU-206ENST00000465525 INCA1Q0VD86 236 aa18.36■□□□□ 0.53
PTPRU-206ENST00000465525 PRPF38BQ5VTL8 546 aaKnown RBP18.36■□□□□ 0.53
PTPRU-206ENST00000465525 ZNF571Q7Z3V5 609 aaPredicted RBP18.36■□□□□ 0.53
PTPRU-206ENST00000465525 NOP9Q86U38 636 aaKnown RBP18.36■□□□□ 0.53
PTPRU-206ENST00000465525 ZNF558Q96NG5 402 aa18.36■□□□□ 0.53
PTPRU-206ENST00000465525 BARX2Q9UMQ3 279 aaPredicted RBP18.36■□□□□ 0.53
PTPRU-206ENST00000465525 COLQQ9Y215 455 aaPredicted RBP18.36■□□□□ 0.53
PTPRU-206ENST00000465525 LINC01553A4QN01 128 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 A8MXQ7 604 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 M0QZQ0 153 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 TACC1O75410 805 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 CYP11B1P15538 503 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 FECHP22830 423 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 BRD2P25440 801 aaKnown RBP18.35■□□□□ 0.53
PTPRU-206ENST00000465525 GNL1P36915 607 aaPredicted RBP18.35■□□□□ 0.53
PTPRU-206ENST00000465525 CCDC142Q17RM4 750 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 FAM171A1Q5VUB5 890 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 FUT10Q6P4F1 479 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 CYP26C1Q6V0L0 522 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 RAD9BQ6WBX8 426 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 DPH6Q7L8W6 267 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 TAS1R1Q7RTX1 841 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 ACOT1Q86TX2 421 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 CEP57Q86XR8 500 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 SLC4A11Q8NBS3 891 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 EPS8L1Q8TE68 723 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 NHEJ1Q9H9Q4 299 aaPredicted RBP18.35■□□□□ 0.53
PTPRU-206ENST00000465525 PCDHB8Q9UN66 801 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 RWDD3Q9Y3V2 267 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 PCDHB12Q9Y5F1 795 aa18.35■□□□□ 0.53
PTPRU-206ENST00000465525 ATP2C2O75185 946 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 CA3P07451 260 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 LINC00271P0C7V0 271 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 CD19P15391 556 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 WARSP23381 471 aaKnown RBP18.34■□□□□ 0.53
PTPRU-206ENST00000465525 PBX2P40425 430 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 PRKCIP41743 596 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 PSMC1P62191 440 aaKnown RBP18.34■□□□□ 0.53
PTPRU-206ENST00000465525 SMAD3P84022 425 aaKnown RBP18.34■□□□□ 0.53
PTPRU-206ENST00000465525 TFAP2BQ92481 460 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 TRIM44Q96DX7 344 aaPredicted RBP18.34■□□□□ 0.53
PTPRU-206ENST00000465525 IGSF21Q96ID5 467 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 ZSWIM1Q9BR11 485 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 VN1R3Q9BXE9 311 aa18.34■□□□□ 0.53
PTPRU-206ENST00000465525 NOCTQ9UK39 431 aaKnown RBP18.34■□□□□ 0.53
PTPRU-206ENST00000465525 YBX2Q9Y2T7 364 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms