RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 SOBPA7XYQ1 873 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 TMEM114B3SHH9 223 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 K7EPI3 171 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 TSPAN1O60635 241 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 KCNJ13O60928 360 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 TRMUO75648 421 aaKnown RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 FUCA1P04066 466 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 PLEKP08567 350 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 ETV3P41162 512 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 COPB1P53618 953 aaKnown RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 POLGP54098 1239 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 CLDN10P78369 228 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 MRPS5P82675 430 aaKnown RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 PFKPQ01813 784 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 MED21Q13503 144 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 UBE4AQ14139 1066 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 KCNJ8Q15842 424 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 NFE2L2Q16236 605 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 BBS9Q3SYG4 887 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 NADK2Q4G0N4 442 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 TIGD2Q4W5G0 525 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 OGFOD2Q6N063 350 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 PDXDC1Q6P996 788 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 USP43Q70EL4 1123 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 ZNF589Q86UQ0 364 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 C2orf69Q8N8R5 385 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 GALNT6Q8NCL4 622 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 LILRB1Q8NHL6 650 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 RAB3IL1Q8TBN0 382 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 PIP4K2CQ8TBX8 421 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 PLEKHO2Q8TD55 490 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 CALML6Q8TD86 181 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 GIMAP1Q8WWP7 306 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 IRGQQ8WZA9 623 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 STAMQ92783 540 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 CDK5RAP3Q96JB5 506 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 LRRC37BQ96QE4 947 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 PSKH2Q96QS6 385 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 TGS1Q96RS0 853 aaKnown RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 ECSITQ9BQ95 431 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 MRPL1Q9BYD6 325 aaKnown RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 CRNKL1Q9BZJ0 848 aaKnown RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 PAIP1Q9H074 479 aaKnown RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 KLHL25Q9H0H3 589 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 RSPH9Q9H1X1 276 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-205ENST00000463753 CCSER2Q9H7U1 834 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 PCDH12Q9NPG4 1184 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 NLRC4Q9NPP4 1024 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 AGPAT5Q9NUQ2 364 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 TBC1D23Q9NUY8 699 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 ABCC12Q96J65 1359 aa3.8□□□□□ -1.8
COL8A1-205ENST00000463753 UMODL1Q5DID0 1318 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 MROH7Q68CQ1 1323 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 MYOCOSA0A1B0GUC4 107 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 BTBD11A6QL63 1104 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 FOXO6A8MYZ6 492 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 H0YIN7 160 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PSMD11O00231 422 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 O00370 1275 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PFDN6O15212 129 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 GJB6O95452 261 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 CLPTM1O96005 669 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 OAS1P00973 400 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 HMOX2P30519 316 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ADSLP30566 484 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ATICP31939 592 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 RFC1P35251 1148 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 MMP13P45452 471 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ACADSBP45954 432 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 CCT4P50991 539 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 IST1P53990 364 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 TUBA4AP68366 448 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 CTAG1AP78358 180 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 EHHADHQ08426 723 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 TEFQ10587 303 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 TRIM14Q14142 442 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 MORC3Q14149 939 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SCARF1Q14162 830 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SUZ12Q15022 739 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SLC39A14Q15043 492 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 SMU1Q2TAY7 513 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 EDRF1Q3B7T1 1238 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 CCDC58Q4VC31 144 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 IGSF11Q5DX21 431 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 TMEM63BQ5T3F8 832 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 CIAPIN1Q6FI81 312 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 NEK5Q6P3R8 708 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 WDR59Q6PJI9 974 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PAOXQ6QHF9 649 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 C4orf50Q6ZRC1 276 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 NOSTRINQ8IVI9 506 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 KIAA2013Q8IYS2 634 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 LINC00469Q8N7U9 141 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 EPS8L3Q8TE67 593 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 HDAC2Q92769 488 aaKnown RBP3.79□□□□□ -1.8
COL8A1-205ENST00000463753 PBXIP1Q96AQ6 731 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 TLCD1Q96CP7 247 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 AIFM3Q96NN9 605 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 GUCD1Q96NT3 240 aa3.79□□□□□ -1.8
COL8A1-205ENST00000463753 ASB2Q96Q27 587 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms