RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 POMCP01189 267 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 ATP1A1P05023 1023 aaKnown RBP20.23■□□□□ 0.83
CCDC78-206ENST00000463539 LILRA4P59901 499 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 FAAP100Q0VG06 881 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 SOWAHAQ2M3V2 549 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 PLEKHG4Q58EX7 1191 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 SEPT8Q92599 483 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 ZNF653Q96CK0 615 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 GTF3C4Q9UKN8 822 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 PCDHGC3Q9UN70 934 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 GRID2IPA4D2P6 1211 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 PODXLO00592 558 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 GRIK3Q13003 919 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 GPNMBQ14956 572 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 DBF4BQ8NFT6 615 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 TPCN2Q8NHX9 752 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 TRIM11Q96F44 468 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 OSGEPQ9NPF4 335 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 CTTNBP2NLQ9P2B4 639 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 CEP83Q9Y592 693 aa20.23■□□□□ 0.83
CCDC78-206ENST00000463539 PDCD11Q14690 1871 aaKnown RBP20.22■□□□□ 0.83
CCDC78-206ENST00000463539 RPL9P32969 192 aaKnown RBP20.22■□□□□ 0.83
CCDC78-206ENST00000463539 CLCNKBP51801 687 aa20.22■□□□□ 0.83
CCDC78-206ENST00000463539 FAM189BP81408 668 aa20.22■□□□□ 0.83
CCDC78-206ENST00000463539 GLB1LQ6UWU2 654 aa20.22■□□□□ 0.83
CCDC78-206ENST00000463539 FAM43BQ6ZT52 329 aaPredicted RBP20.22■□□□□ 0.83
CCDC78-206ENST00000463539 TMEM35BQ8NCS4 154 aa20.22■□□□□ 0.83
CCDC78-206ENST00000463539 APPL2Q8NEU8 664 aa20.22■□□□□ 0.83
CCDC78-206ENST00000463539 APBB2Q92870 758 aa20.22■□□□□ 0.83
CCDC78-206ENST00000463539 HEXIM2Q96MH2 286 aaKnown RBP20.22■□□□□ 0.83
CCDC78-206ENST00000463539 CACNG4Q9UBN1 327 aa20.22■□□□□ 0.83
CCDC78-206ENST00000463539 ATP11BQ9Y2G3 1177 aa20.22■□□□□ 0.83
CCDC78-206ENST00000463539 MRFAP1Q9Y605 127 aa20.22■□□□□ 0.83
CCDC78-206ENST00000463539 TRIP11Q15643 1979 aa20.21■□□□□ 0.83
CCDC78-206ENST00000463539 CASTOR2A6NHX0 329 aa20.21■□□□□ 0.83
CCDC78-206ENST00000463539 INPPL1O15357 1258 aa20.21■□□□□ 0.83
CCDC78-206ENST00000463539 ATMINO43313 823 aaPredicted RBP20.21■□□□□ 0.83
CCDC78-206ENST00000463539 HUS1O60921 280 aa20.21■□□□□ 0.83
CCDC78-206ENST00000463539 CYP1A2P05177 515 aa20.21■□□□□ 0.83
CCDC78-206ENST00000463539 MYBL1P10243 752 aa20.21■□□□□ 0.83
CCDC78-206ENST00000463539 VDRP11473 427 aa20.21■□□□□ 0.83
CCDC78-206ENST00000463539 TCEAL1Q15170 157 aa20.21■□□□□ 0.83
CCDC78-206ENST00000463539 PAPD7Q5XG87 772 aaKnown RBP20.21■□□□□ 0.83
CCDC78-206ENST00000463539 UNC93AQ86WB7 457 aa20.21■□□□□ 0.83
CCDC78-206ENST00000463539 MCOLN2Q8IZK6 566 aa20.21■□□□□ 0.83
CCDC78-206ENST00000463539 OR6B3Q8NGW1 331 aa20.21■□□□□ 0.83
CCDC78-206ENST00000463539 PPP1R12CQ9BZL4 782 aa20.21■□□□□ 0.83
CCDC78-206ENST00000463539 KIAA1257Q9ULG3 409 aa20.21■□□□□ 0.83
CCDC78-206ENST00000463539 PARNO95453 639 aaKnown RBP20.2■□□□□ 0.82
CCDC78-206ENST00000463539 CCL23P55773 120 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 AMPD2Q01433 879 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 TUBB2AQ13885 445 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 SGO2Q562F6 1265 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 MON1BQ7L1V2 547 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 PHF13Q86YI8 300 aaPredicted RBP20.2■□□□□ 0.82
CCDC78-206ENST00000463539 TOP6BLQ8N6T0 577 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 LRRC57Q8N9N7 239 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 C1orf131Q8NDD1 294 aaKnown RBP20.2■□□□□ 0.82
CCDC78-206ENST00000463539 SCLYQ96I15 445 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 CALR3Q96L12 384 aaKnown RBP20.2■□□□□ 0.82
CCDC78-206ENST00000463539 TUBB2BQ9BVA1 445 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 ZNF518BQ9C0D4 1074 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 WNT8AQ9H1J5 351 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 C11orf49Q9H6J7 331 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 CNOT8Q9UFF9 292 aaKnown RBP20.2■□□□□ 0.82
CCDC78-206ENST00000463539 L1RE1Q9UN81 338 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 COG5Q9UP83 839 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 FTCDO95954 541 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 TUSC3Q13454 348 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 UPP1Q16831 310 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 DPH6Q7L8W6 267 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 LIMS2Q7Z4I7 341 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 ADGRF2Q8IZF7 708 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 SYCE1Q8N0S2 351 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 KBTBD7Q8WVZ9 684 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 C11orf70Q9BRQ4 267 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 SNX25Q9H3E2 840 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 TMEM161AQ9NX61 479 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 ADAM22Q9P0K1 906 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 CDC23Q9UJX2 597 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 SAR1BQ9Y6B6 198 aa20.2■□□□□ 0.82
CCDC78-206ENST00000463539 A8MXQ7 604 aa20.19■□□□□ 0.82
CCDC78-206ENST00000463539 CDH5P33151 784 aaPredicted RBP20.19■□□□□ 0.82
CCDC78-206ENST00000463539 HADHBP55084 474 aaKnown RBP20.19■□□□□ 0.82
CCDC78-206ENST00000463539 C1QBPQ07021 282 aaKnown RBP20.19■□□□□ 0.82
CCDC78-206ENST00000463539 DENND1BQ6P3S1 775 aa20.19■□□□□ 0.82
CCDC78-206ENST00000463539 MMS22LQ6ZRQ5 1243 aa20.19■□□□□ 0.82
CCDC78-206ENST00000463539 DAAM2Q86T65 1068 aa20.19■□□□□ 0.82
CCDC78-206ENST00000463539 MYRIPQ8NFW9 859 aa20.19■□□□□ 0.82
CCDC78-206ENST00000463539 DDX27Q96GQ7 796 aaKnown RBP20.19■□□□□ 0.82
CCDC78-206ENST00000463539 PAWRQ96IZ0 340 aaKnown RBP20.19■□□□□ 0.82
CCDC78-206ENST00000463539 VCPIP1Q96JH7 1222 aa20.19■□□□□ 0.82
CCDC78-206ENST00000463539 NUP85Q9BW27 656 aa20.19■□□□□ 0.82
CCDC78-206ENST00000463539 DNAI2Q9GZS0 605 aa20.19■□□□□ 0.82
CCDC78-206ENST00000463539 LHX5Q9H2C1 402 aa20.19■□□□□ 0.82
CCDC78-206ENST00000463539 AVENQ9NQS1 362 aaPredicted RBP20.19■□□□□ 0.82
CCDC78-206ENST00000463539 UVRAGQ9P2Y5 699 aa20.19■□□□□ 0.82
CCDC78-206ENST00000463539 CHORDC1Q9UHD1 332 aaPredicted RBP20.19■□□□□ 0.82
CCDC78-206ENST00000463539 TBX21Q9UL17 535 aa20.19■□□□□ 0.82
CCDC78-206ENST00000463539 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms