RNA–Protein interactions for RNA: ENST00000461720.5

COL11A1-206, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-206ENST00000461720 SPTLC2O15270 562 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 VNN2O95498 520 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 LMNAP02545 664 aaKnown RBP13.57□□□□□ -0.24
COL11A1-206ENST00000461720 SP9P0CG40 484 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 GLULP15104 373 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 GDI1P31150 447 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 NASPP49321 788 aaPredicted RBP13.57□□□□□ -0.24
COL11A1-206ENST00000461720 AMPD3Q01432 767 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 KCNA1Q09470 495 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 MGAT5BQ3V5L5 792 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 CRELD2Q6UXH1 353 aaPredicted RBP13.57□□□□□ -0.24
COL11A1-206ENST00000461720 DNAJB7Q7Z6W7 309 aaPredicted RBP13.57□□□□□ -0.24
COL11A1-206ENST00000461720 MFSD6LQ8IWD5 586 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 SHKBP1Q8TBC3 707 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 PSMG2Q969U7 264 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 SAAL1Q96ER3 474 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 BORCS6Q96GS4 357 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 GCNAQ96QF7 691 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 ZCWPW1Q9H0M4 648 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 IKZF4Q9H2S9 585 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 ATXN3LQ9H3M9 355 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 TRPV5Q9NQA5 729 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 RBAKQ9NYW8 714 aaPredicted RBP13.57□□□□□ -0.24
COL11A1-206ENST00000461720 FBXO4Q9UKT5 387 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 R4GN57 208 aa13.57□□□□□ -0.24
COL11A1-206ENST00000461720 PTPRZ1P23471 2315 aaPredicted RBP13.56□□□□□ -0.24
COL11A1-206ENST00000461720 KIAA0391O15091 583 aaKnown RBP13.56□□□□□ -0.24
COL11A1-206ENST00000461720 HUS1O60921 280 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 MOSPD3O75425 235 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 VIPR2P41587 438 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 RPS9P46781 194 aaKnown RBP13.56□□□□□ -0.24
COL11A1-206ENST00000461720 TSPY1Q01534 308 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 ZNF528Q3MIS6 628 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 WSCD1Q658N2 575 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 POTEHQ6S545 545 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 VITQ6UXI7 678 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 BRSK2Q8IWQ3 736 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 EFCAB13Q8IY85 973 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 LINC00301Q8NCQ3 95 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 OR10T2Q8NGX3 314 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 SPPL2BQ8TCT7 592 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 CSGALNACT1Q8TDX6 532 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 TMEM209Q96SK2 561 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 LRRC3Q9BY71 257 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 DNAJC25Q9H1X3 360 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 TNMDQ9H2S6 317 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 CRISPLD1Q9H336 500 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 CUEDC2Q9H467 287 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 ZNF334Q9HCZ1 680 aaPredicted RBP13.56□□□□□ -0.24
COL11A1-206ENST00000461720 AGAP1Q9UPQ3 857 aa13.56□□□□□ -0.24
COL11A1-206ENST00000461720 FRMD3A2A2Y4 597 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 HEPACAM2A8MVW5 462 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 EXTL3O43909 919 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 KINO60870 393 aaKnown RBP13.55□□□□□ -0.24
COL11A1-206ENST00000461720 PPP6R2O75170 966 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 SOAT2O75908 522 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 TARSP26639 723 aaKnown RBP13.55□□□□□ -0.24
COL11A1-206ENST00000461720 GABRR2P28476 465 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 CDC25CP30307 473 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 CASP5P51878 434 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 CSTF1Q05048 431 aaKnown RBP13.55□□□□□ -0.24
COL11A1-206ENST00000461720 PPP2R5DQ14738 602 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 C1orf228Q6PIY5 440 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 TMC8Q8IU68 726 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 HSCBQ8IWL3 235 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 CSGALNACT2Q8N6G5 542 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 TTC9BQ8N6N2 239 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 IQUBQ8NA54 791 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 ATRIPQ8WXE1 791 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 FAM3CQ92520 227 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 CLDN23Q96B33 292 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 HINFPQ9BQA5 517 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 PCIF1Q9H4Z3 704 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 ABI2Q9NYB9 513 aaPredicted RBP13.55□□□□□ -0.24
COL11A1-206ENST00000461720 TFIP11Q9UBB9 837 aaKnown RBP13.55□□□□□ -0.24
COL11A1-206ENST00000461720 ITGA11Q9UKX5 1188 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 NDRG2Q9UN36 371 aaKnown RBP13.55□□□□□ -0.24
COL11A1-206ENST00000461720 PCDHB5Q9Y5E4 795 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 PIAS3Q9Y6X2 628 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 RIF1Q5UIP0 2472 aaKnown RBP13.55□□□□□ -0.24
COL11A1-206ENST00000461720 ANK1P16157 1881 aa13.55□□□□□ -0.24
COL11A1-206ENST00000461720 A0A087X0B3 334 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 GOLGA8IPA6NC78 632 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 GOLGA8JA6NMD2 632 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 CHADO15335 359 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 CUTAO60888 179 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 PRPF6O94906 941 aaKnown RBP13.54□□□□□ -0.24
COL11A1-206ENST00000461720 YEATS4O95619 227 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 ITGB3P05106 788 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 KRT19P08727 400 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 TMEM191BP0C7N4 346 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 POLR2BP30876 1174 aaKnown RBP13.54□□□□□ -0.24
COL11A1-206ENST00000461720 KPNA1P52294 538 aaPredicted RBP13.54□□□□□ -0.24
COL11A1-206ENST00000461720 RBP5P82980 135 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 BFSP1Q12934 665 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 MYO1EQ12965 1108 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 SURF1Q15526 300 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 NFE2Q16621 373 aaPredicted RBP13.54□□□□□ -0.24
COL11A1-206ENST00000461720 GPR158Q5T848 1215 aa13.54□□□□□ -0.24
COL11A1-206ENST00000461720 GAREM2Q75VX8 874 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms