RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 CBWD2Q8IUF1 395 aa16.74■□□□□ 0.27
NUP50-213ENST00000461437 NELFCDQ8IXH7 590 aa16.74■□□□□ 0.27
NUP50-213ENST00000461437 SEPT5Q99719 369 aaPredicted RBP16.74■□□□□ 0.27
NUP50-213ENST00000461437 LRRC3Q9BY71 257 aa16.74■□□□□ 0.27
NUP50-213ENST00000461437 MTMR12Q9C0I1 747 aa16.74■□□□□ 0.27
NUP50-213ENST00000461437 ASAH2Q9NR71 780 aa16.74■□□□□ 0.27
NUP50-213ENST00000461437 TMLHEQ9NVH6 421 aa16.74■□□□□ 0.27
NUP50-213ENST00000461437 MTF2Q9Y483 593 aaPredicted RBP16.74■□□□□ 0.27
NUP50-213ENST00000461437 KPNA7A9QM74 516 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 CLIC2O15247 247 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 EXTL3O43909 919 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 KRT19P08727 400 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 GPR15P49685 360 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 CUL4BQ13620 913 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 MYBPC2Q14324 1141 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 ANGPT1Q15389 498 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 MLF2Q15773 248 aaPredicted RBP16.73■□□□□ 0.27
NUP50-213ENST00000461437 SLC44A4Q53GD3 710 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 GPD1LQ8N335 351 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 IQUBQ8NA54 791 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 OR5B17Q8NGF7 314 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 CXorf38Q8TB03 319 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 GIPC2Q8TF65 315 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 RSPRY1Q96DX4 576 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 ZCWPW1Q9H0M4 648 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 TMEM206Q9H813 350 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 HEBP1Q9NRV9 189 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 GDE1Q9NZC3 331 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 ZDHHC9Q9Y397 364 aa16.73■□□□□ 0.27
NUP50-213ENST00000461437 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.73■□□□□ 0.27
NUP50-213ENST00000461437 VPS13AQ96RL7 3174 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 ZNF197O14709 1029 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 ECI2O75521 394 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 ATF6P18850 670 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 ACAT1P24752 427 aaKnown RBP16.72■□□□□ 0.27
NUP50-213ENST00000461437 EPHB3P54753 998 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 ALCAMQ13740 583 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 MGAT5BQ3V5L5 792 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 SV2CQ496J9 727 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 FAM26FQ5R3K3 315 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 RESP18Q5W5W9 173 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 VITQ6UXI7 678 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 EPM2AIP1Q7L775 607 aaPredicted RBP16.72■□□□□ 0.27
NUP50-213ENST00000461437 FRMD5Q7Z6J6 570 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 OSTM1Q86WC4 334 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 METTL23Q86XA0 190 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 CSGALNACT2Q8N6G5 542 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 RDH13Q8NBN7 331 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 ZSCAN18Q8TBC5 510 aaPredicted RBP16.72■□□□□ 0.27
NUP50-213ENST00000461437 KCNG4Q8TDN1 519 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 ASB16Q96NS5 453 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 C7orf25Q9BPX7 421 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 SLITRK6Q9H5Y7 841 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 SLC39A2Q9NP94 309 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 ABI2Q9NYB9 513 aaPredicted RBP16.72■□□□□ 0.27
NUP50-213ENST00000461437 HSPBP1Q9NZL4 362 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 SERTAD1Q9UHV2 236 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 SIX4Q9UIU6 781 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 L1RE1Q9UN81 338 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 PTPRDP23468 1912 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 GREB1Q4ZG55 1949 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 FANCMQ8IYD8 2048 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 F5P12259 2224 aa16.72■□□□□ 0.27
NUP50-213ENST00000461437 TGFB1I1O43294 461 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 LDHAP00338 332 aaKnown RBP16.71■□□□□ 0.27
NUP50-213ENST00000461437 ALDH1A3P47895 512 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 CYP2J2P51589 502 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 NUBP1P53384 320 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 EPHA5P54756 1037 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 STARD6P59095 220 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 CYP4F8P98187 520 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 PLD1Q13393 1074 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 UBXN2BQ14CS0 331 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 SDHAF4Q5VUM1 108 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 TPRG1Q6ZUI0 275 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 GAREM2Q75VX8 874 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 DNAJB7Q7Z6W7 309 aaPredicted RBP16.71■□□□□ 0.27
NUP50-213ENST00000461437 PDCL2Q8N4E4 241 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 PJA1Q8NG27 643 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 FAM200AQ8TCP9 573 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 ELSPBP1Q96BH3 223 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 ZNF560Q96MR9 790 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 CUEDC2Q9H467 287 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 ZFP14Q9HCL3 533 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 FAM13BQ9NYF5 915 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 DLGAP2Q9P1A6 1054 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 SIT1Q9Y3P8 196 aa16.71■□□□□ 0.27
NUP50-213ENST00000461437 ANAPC1Q9H1A4 1944 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 GFRA3O60609 400 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 TMEM191BP0C7N4 346 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 GABRR2P28476 465 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 AMPD3Q01432 767 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 POU5F1Q01860 360 aaKnown RBP16.7■□□□□ 0.26
NUP50-213ENST00000461437 PHLDB3Q6NSJ2 640 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 UNC13DQ70J99 1090 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 ASCL5Q7RTU5 278 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 NT5DC4Q86YG4 428 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 THEM5Q8N1Q8 247 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 ZNF507Q8TCN5 953 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 SCFD1Q8WVM8 642 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms