RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 SLC25A43Q8WUT9 341 aaPredicted RBP4.65□□□□□ -1.67
CLK1-206ENST00000461326 MRGPRX1Q96LB2 322 aa4.65□□□□□ -1.67
CLK1-206ENST00000461326 SGCZQ96LD1 299 aa4.65□□□□□ -1.67
CLK1-206ENST00000461326 ZNF512Q96ME7 567 aaPredicted RBP4.65□□□□□ -1.67
CLK1-206ENST00000461326 NT5C1BQ96P26 610 aa4.65□□□□□ -1.67
CLK1-206ENST00000461326 APOL5Q9BWW9 433 aa4.65□□□□□ -1.67
CLK1-206ENST00000461326 DPH1Q9BZG8 443 aa4.65□□□□□ -1.67
CLK1-206ENST00000461326 BRD9Q9H8M2 597 aa4.65□□□□□ -1.67
CLK1-206ENST00000461326 AGO3Q9H9G7 860 aaKnown RBP4.65□□□□□ -1.67
CLK1-206ENST00000461326 RSAD1Q9HA92 442 aa4.65□□□□□ -1.67
CLK1-206ENST00000461326 SERHLQ9NQF3 203 aa4.65□□□□□ -1.67
CLK1-206ENST00000461326 HDAC5Q9UQL6 1122 aa4.65□□□□□ -1.67
CLK1-206ENST00000461326 DAAM1Q9Y4D1 1078 aa4.65□□□□□ -1.67
CLK1-206ENST00000461326 PCDHA1Q9Y5I3 950 aa4.65□□□□□ -1.67
CLK1-206ENST00000461326 ZAR1LA6NP61 321 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 TBKBP1A7MCY6 615 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 KRTAP29-1A8MX34 341 aaPredicted RBP4.64□□□□□ -1.67
CLK1-206ENST00000461326 PRR5-ARHGAP8B1AHC4 643 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 TBX3O15119 743 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 IL18RAPO95256 599 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 POMCP01189 267 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 KITP10721 976 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 RARBP10826 455 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 PIK3CBP42338 1070 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 KCNJ5P48544 419 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 POU6F2P78424 691 aaPredicted RBP4.64□□□□□ -1.67
CLK1-206ENST00000461326 RAB32Q13637 225 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 TOB2Q14106 344 aaPredicted RBP4.64□□□□□ -1.67
CLK1-206ENST00000461326 ZRSR2Q15696 482 aaKnown RBP4.64□□□□□ -1.67
CLK1-206ENST00000461326 BMT2Q1RMZ1 405 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 FKBP15Q5T1M5 1219 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 C10orf62Q5T681 223 aaPredicted RBP4.64□□□□□ -1.67
CLK1-206ENST00000461326 IZUMO3Q5VZ72 239 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 ZNF529Q6P280 563 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 C1orf228Q6PIY5 440 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 Q6ZRM9 215 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 MYLK4Q86YV6 388 aaPredicted RBP4.64□□□□□ -1.67
CLK1-206ENST00000461326 FBXO18Q8NFZ0 1043 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 STON2Q8WXE9 905 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 BRI3BPQ8WY22 251 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 TNPO1Q92973 898 aaKnown RBP4.64□□□□□ -1.67
CLK1-206ENST00000461326 LENG9Q96B70 501 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 NMD3Q96D46 503 aaKnown RBP4.64□□□□□ -1.67
CLK1-206ENST00000461326 RIPOR3Q96MK2 946 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 TBCBQ99426 244 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 ARPC5LQ9BPX5 153 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 NDC1Q9BTX1 674 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.64□□□□□ -1.67
CLK1-206ENST00000461326 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.64□□□□□ -1.67
CLK1-206ENST00000461326 SLC23A1Q9UHI7 598 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 CPA4Q9UI42 421 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 PCDHA6Q9UN73 950 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 CORO2BQ9UQ03 480 aa4.64□□□□□ -1.67
CLK1-206ENST00000461326 KIAA0391O15091 583 aaKnown RBP4.63□□□□□ -1.67
CLK1-206ENST00000461326 MFAP3LO75121 409 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 PPFIA4O75335 1185 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 FOSP01100 380 aaPredicted RBP4.63□□□□□ -1.67
CLK1-206ENST00000461326 ERBB2P04626 1255 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 CDK4P11802 303 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 TNFSF4P23510 183 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 SERPINB3P29508 390 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 FMO1Q01740 532 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 ZNF543Q08ER8 600 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 STK3Q13188 491 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 PTPAQ15257 358 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 DCAF17Q5H9S7 520 aaPredicted RBP4.63□□□□□ -1.67
CLK1-206ENST00000461326 STRIP1Q5VSL9 837 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 XRRA1Q6P2D8 792 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 IPCEF1Q8WWN9 437 aaPredicted RBP4.63□□□□□ -1.67
CLK1-206ENST00000461326 SCAMP4Q969E2 229 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 C1orf43Q9BWL3 253 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 BRIP1Q9BX63 1249 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 EIF2AQ9BY44 585 aaKnown RBP4.63□□□□□ -1.67
CLK1-206ENST00000461326 ZNF518BQ9C0D4 1074 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 GPR35Q9HC97 309 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 TRMT13Q9NUP7 481 aaKnown RBP4.63□□□□□ -1.67
CLK1-206ENST00000461326 LRCH1Q9Y2L9 728 aa4.63□□□□□ -1.67
CLK1-206ENST00000461326 TRIM43BA6NCK2 446 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 KPNA5O15131 536 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 TBC1D4O60343 1298 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 TCEA3O75764 348 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 AHSGP02765 367 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 GJB1P08034 283 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 PARP1P09874 1014 aaKnown RBP4.62□□□□□ -1.67
CLK1-206ENST00000461326 TSHRP16473 764 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 STT3AP46977 705 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 SUMO3P55854 103 aaPredicted RBP4.62□□□□□ -1.67
CLK1-206ENST00000461326 EXOSC9Q06265 439 aaKnown RBP4.62□□□□□ -1.67
CLK1-206ENST00000461326 SLC13A2Q13183 592 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 DHX8Q14562 1220 aaKnown RBP4.62□□□□□ -1.67
CLK1-206ENST00000461326 ACAP1Q15027 740 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 LY6G5CQ5SRR4 150 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 ATXN7L2Q5T6C5 722 aaPredicted RBP4.62□□□□□ -1.67
CLK1-206ENST00000461326 LMBRD2Q68DH5 695 aaPredicted RBP4.62□□□□□ -1.67
CLK1-206ENST00000461326 EFCAB12Q6NXP0 572 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 GPRIN1Q7Z2K8 1008 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 ADGRG3Q86Y34 549 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 FITM2Q8N6M3 262 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 SLC35B2Q8TB61 432 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 ST8SIA2Q92186 375 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms