RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 FILIP1Q7Z7B0 1213 aa22.14■■□□□ 1.13
RPUSD3-210ENST00000460909 METTL23Q86XA0 190 aa22.14■■□□□ 1.13
RPUSD3-210ENST00000460909 TMEM86AQ8N2M4 240 aa22.14■■□□□ 1.13
RPUSD3-210ENST00000460909 RHOBTB2Q9BYZ6 727 aa22.14■■□□□ 1.13
RPUSD3-210ENST00000460909 ZDHHC7Q9NXF8 308 aa22.14■■□□□ 1.13
RPUSD3-210ENST00000460909 RWDD2AQ9UIY3 292 aa22.14■■□□□ 1.13
RPUSD3-210ENST00000460909 FAM50BQ9Y247 325 aa22.14■■□□□ 1.13
RPUSD3-210ENST00000460909 CCDC195A0A1B0GUA6 201 aa22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 GABRDO14764 452 aa22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 C8AP07357 584 aa22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 WEE2P0C1S8 567 aa22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 NLRP12P59046 1061 aa22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 GPR17Q13304 367 aa22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 CBX2Q14781 532 aaPredicted RBP22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 UVSSAQ2YD98 709 aa22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 CES5AQ6NT32 575 aa22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 RNF19BQ6ZMZ0 732 aa22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 OSTM1Q86WC4 334 aa22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 TCEAL8Q8IYN2 117 aa22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 SPATA18Q8TC71 538 aa22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 SYAP1Q96A49 352 aaPredicted RBP22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 ZCWPW1Q9H0M4 648 aa22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 AFF4Q9UHB7 1163 aaKnown RBP22.13■■□□□ 1.13
RPUSD3-210ENST00000460909 TTC28Q96AY4 2481 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 SEC24AO95486 1093 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 CPB1P15086 417 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 GTF2H1P32780 548 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 WDR72Q3MJ13 1102 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 RTL10Q7L3V2 364 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 FRMD5Q7Z6J6 570 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 THEM5Q8N1Q8 247 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 SLC7A14Q8TBB6 771 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 ADAMTS19Q8TE59 1207 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 KBTBD7Q8WVZ9 684 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 ELMO3Q96BJ8 720 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 PRKD2Q9BZL6 878 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 TMEM8AQ9HCN3 771 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 ARMCX3Q9UH62 379 aaPredicted RBP22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 MAFFQ9ULX9 164 aa22.12■■□□□ 1.13
RPUSD3-210ENST00000460909 DENND4AQ7Z401 1863 aa22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 SPDYE4A6NLX3 237 aa22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 ASS1P00966 412 aaKnown RBP22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 HLA-DRAP01903 254 aa22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 HOXA9P31269 272 aa22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 LIN9Q5TKA1 542 aa22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 CYP26C1Q6V0L0 522 aa22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 LRRTM3Q86VH5 581 aa22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 ADGRF2Q8IZF7 708 aa22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 TAS1R2Q8TE23 839 aa22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 SLC35C1Q96A29 364 aa22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 SRRTQ9BXP5 876 aaKnown RBP22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 METTL14Q9HCE5 456 aaKnown RBP22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 DDX43Q9NXZ2 648 aaKnown RBP22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 PRKAG3Q9UGI9 489 aa22.11■■□□□ 1.13
RPUSD3-210ENST00000460909 HCRTO43612 131 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 TACC1O75410 805 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 HNRNPA1P09651 372 aaKnown RBP eCLIP22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 MTHFRP42898 656 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 LHX1P48742 406 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 MARSP56192 900 aaKnown RBP22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 ADCY1Q08828 1119 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 SGSM1Q2NKQ1 1148 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 ZNF699Q32M78 642 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 PPM1LQ5SGD2 360 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 ATAT1Q5SQI0 421 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 KRT39Q6A163 491 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 CCDC149Q6ZUS6 474 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 TAF4BQ92750 862 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 DOCK6Q96HP0 2047 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 RIPOR3Q96MK2 946 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 NECTIN4Q96NY8 510 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 NECAB3Q96P71 396 aaPredicted RBP22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 MMS19Q96T76 1030 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 ACBD6Q9BR61 282 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 CRISPLD1Q9H336 500 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 POMKQ9H5K3 350 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 MMRN2Q9H8L6 949 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 TMEM63CQ9P1W3 806 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 POLIQ9UNA4 740 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 NCOR1O75376 2440 aa22.1■■□□□ 1.13
RPUSD3-210ENST00000460909 BDP1A6H8Y1 2624 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 MTMR11A4FU01 709 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 LRRN2O75325 713 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 POU2F2P09086 479 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 FAM163BP0C2L3 166 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 WARSP23381 471 aaKnown RBP22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 TNNC1P63316 161 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 ZP2Q05996 745 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 CBWD6Q4V339 395 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 CBWD3Q5JTY5 395 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 CBWD5Q5RIA9 395 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 CCDC183Q5T5S1 534 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 SMG7Q92540 1137 aaKnown RBP22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 PGLYRP2Q96PD5 576 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 PKMYT1Q99640 499 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 MRPL45Q9BRJ2 306 aaKnown RBP22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 CYP4F11Q9HBI6 524 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 NXF1Q9UBU9 619 aaKnown RBP22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 NME7Q9Y5B8 376 aa22.09■■□□□ 1.13
RPUSD3-210ENST00000460909 C19orf67A6NJJ6 358 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms