RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 PSMG2Q969U7 264 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 FAM213AQ9BRX8 229 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 ZCWPW1Q9H0M4 648 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 PANK4Q9NVE7 773 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 SLC27A5Q9Y2P5 690 aa24.6■■□□□ 1.53
PTPN4-207ENST00000460162 MTF2Q9Y483 593 aaPredicted RBP24.6■■□□□ 1.53
PTPN4-207ENST00000460162 A0A1W2PRU2 124 aa24.59■■□□□ 1.53
PTPN4-207ENST00000460162 CYB561D2O14569 222 aa24.59■■□□□ 1.53
PTPN4-207ENST00000460162 NCAM2O15394 837 aa24.59■■□□□ 1.53
PTPN4-207ENST00000460162 FGF19O95750 216 aa24.59■■□□□ 1.53
PTPN4-207ENST00000460162 CD72P21854 359 aa24.59■■□□□ 1.53
PTPN4-207ENST00000460162 TARSP26639 723 aaKnown RBP24.59■■□□□ 1.53
PTPN4-207ENST00000460162 SMARCB1Q12824 385 aa24.59■■□□□ 1.53
PTPN4-207ENST00000460162 SYCP3Q8IZU3 236 aa24.59■■□□□ 1.53
PTPN4-207ENST00000460162 THEM5Q8N1Q8 247 aa24.59■■□□□ 1.53
PTPN4-207ENST00000460162 C2orf15Q8WU43 125 aaKnown RBP24.59■■□□□ 1.53
PTPN4-207ENST00000460162 TNMDQ9H2S6 317 aa24.59■■□□□ 1.53
PTPN4-207ENST00000460162 TMEM206Q9H813 350 aa24.59■■□□□ 1.53
PTPN4-207ENST00000460162 SPATA6Q9NWH7 488 aaPredicted RBP24.59■■□□□ 1.53
PTPN4-207ENST00000460162 KPNA7A9QM74 516 aa24.58■■□□□ 1.53
PTPN4-207ENST00000460162 RPS9P46781 194 aaKnown RBP24.58■■□□□ 1.53
PTPN4-207ENST00000460162 TUFMP49411 452 aaKnown RBP24.58■■□□□ 1.53
PTPN4-207ENST00000460162 SLC39A12Q504Y0 691 aa24.58■■□□□ 1.53
PTPN4-207ENST00000460162 CCDC65Q8IXS2 484 aa24.58■■□□□ 1.53
PTPN4-207ENST00000460162 PDILTQ8N807 584 aa24.58■■□□□ 1.53
PTPN4-207ENST00000460162 CLDN23Q96B33 292 aa24.58■■□□□ 1.53
PTPN4-207ENST00000460162 SAAL1Q96ER3 474 aa24.58■■□□□ 1.53
PTPN4-207ENST00000460162 RBAKQ9NYW8 714 aaPredicted RBP24.58■■□□□ 1.53
PTPN4-207ENST00000460162 FBXO4Q9UKT5 387 aa24.58■■□□□ 1.53
PTPN4-207ENST00000460162 R4GN57 208 aa24.58■■□□□ 1.53
PTPN4-207ENST00000460162 MAN2B1O00754 1011 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 LAMTOR5O43504 91 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 PPP6R2O75170 966 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 LMNAP02545 664 aaKnown RBP24.57■■□□□ 1.52
PTPN4-207ENST00000460162 GDI1P31150 447 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 VIPR2P41587 438 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 VEPH1Q14D04 833 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 ZNF528Q3MIS6 628 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 DNAJB7Q7Z6W7 309 aaPredicted RBP24.57■■□□□ 1.52
PTPN4-207ENST00000460162 MFSD6LQ8IWD5 586 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 MAML2Q8IZL2 1156 aaPredicted RBP24.57■■□□□ 1.52
PTPN4-207ENST00000460162 ADSSL1Q8N142 457 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 SPPL2BQ8TCT7 592 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 BORCS6Q96GS4 357 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 ZNF396Q96N95 335 aaPredicted RBP24.57■■□□□ 1.52
PTPN4-207ENST00000460162 SEPT5Q99719 369 aaPredicted RBP24.57■■□□□ 1.52
PTPN4-207ENST00000460162 FGFBP2Q9BYJ0 223 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 PANK2Q9BZ23 570 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 LRRC27Q9C0I9 530 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 CUEDC2Q9H467 287 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 ZNF334Q9HCZ1 680 aaPredicted RBP24.57■■□□□ 1.52
PTPN4-207ENST00000460162 NCANO14594 1321 aa24.57■■□□□ 1.52
PTPN4-207ENST00000460162 F5P12259 2224 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 SHISA7A6NL88 538 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 KIAA0391O15091 583 aaKnown RBP24.56■■□□□ 1.52
PTPN4-207ENST00000460162 SPTLC2O15270 562 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 EXTL3O43909 919 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 SOAT2O75908 522 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 YEATS4O95619 227 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 ATF6P18850 670 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 WNT7BP56706 349 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 TFAMQ00059 246 aaKnown RBP24.56■■□□□ 1.52
PTPN4-207ENST00000460162 MGAT5BQ3V5L5 792 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 WSCD1Q658N2 575 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 STXBP4Q6ZWJ1 553 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 SNX21Q969T3 373 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 CBWD1Q9BRT8 395 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 ZNF292O60281 2723 aa24.56■■□□□ 1.52
PTPN4-207ENST00000460162 HEPACAM2A8MVW5 462 aa24.55■■□□□ 1.52
PTPN4-207ENST00000460162 ZNF263O14978 683 aa24.55■■□□□ 1.52
PTPN4-207ENST00000460162 ITGB3P05106 788 aa24.55■■□□□ 1.52
PTPN4-207ENST00000460162 GABRR2P28476 465 aa24.55■■□□□ 1.52
PTPN4-207ENST00000460162 POLR2BP30876 1174 aaKnown RBP24.55■■□□□ 1.52
PTPN4-207ENST00000460162 E2F4Q16254 413 aa24.55■■□□□ 1.52
PTPN4-207ENST00000460162 GAREM2Q75VX8 874 aa24.55■■□□□ 1.52
PTPN4-207ENST00000460162 LRRC52Q8N7C0 313 aa24.55■■□□□ 1.52
PTPN4-207ENST00000460162 C1orf127Q8N9H9 656 aa24.55■■□□□ 1.52
PTPN4-207ENST00000460162 CACTINQ8WUQ7 758 aaKnown RBP24.55■■□□□ 1.52
PTPN4-207ENST00000460162 KBTBD4Q9NVX7 518 aa24.55■■□□□ 1.52
PTPN4-207ENST00000460162 ITGA11Q9UKX5 1188 aa24.55■■□□□ 1.52
PTPN4-207ENST00000460162 PIAS3Q9Y6X2 628 aa24.55■■□□□ 1.52
PTPN4-207ENST00000460162 SPTBN4Q9H254 2564 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 KIF26AQ9ULI4 1882 aaPredicted RBP24.54■■□□□ 1.52
PTPN4-207ENST00000460162 ARNTLO00327 626 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 FCHO2Q0JRZ9 810 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 ARHGAP15Q53QZ3 475 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 STXBP5Q5T5C0 1151 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 DCP1BQ8IZD4 617 aaKnown RBP24.54■■□□□ 1.52
PTPN4-207ENST00000460162 GPD1LQ8N335 351 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 ZSWIM2Q8NEG5 633 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 FAM200AQ8TCP9 573 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 KCNG4Q8TDN1 519 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 MSANTD3Q96H12 275 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 LPIN3Q9BQK8 851 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 IER2Q9BTL4 223 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 MKNK1Q9BUB5 465 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 ATXN3LQ9H3M9 355 aa24.54■■□□□ 1.52
PTPN4-207ENST00000460162 OBSL1O75147 1896 aa24.53■■□□□ 1.52
PTPN4-207ENST00000460162 DENND4CQ5VZ89 1909 aa24.53■■□□□ 1.52
PTPN4-207ENST00000460162 PRPF6O94906 941 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms