RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 MYO1AQ9UBC5 1043 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 CDYLQ9Y232 598 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 ATP11BQ9Y2G3 1177 aa6.61□□□□□ -1.35
CCDC50-203ENST00000460064 FCER1AP12319 257 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 FDXRP22570 491 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 HIBADHP31937 336 aaKnown RBP6.6□□□□□ -1.35
CCDC50-203ENST00000460064 IL6STP40189 918 aaPredicted RBP6.6□□□□□ -1.35
CCDC50-203ENST00000460064 CARSP49589 748 aaKnown RBP6.6□□□□□ -1.35
CCDC50-203ENST00000460064 RABGGTBP53611 331 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 TNFAIP2Q03169 654 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 PIGFQ07326 219 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 SLFN5Q08AF3 891 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 ZNF844Q08AG5 666 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 GRM1Q13255 1194 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 DCAF12L1Q5VU92 463 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 METRNLQ641Q3 311 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 BEND5Q7L4P6 421 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 OR56A3Q8NH54 315 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 Q8TCH9 128 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 IPCEF1Q8WWN9 437 aaPredicted RBP6.6□□□□□ -1.35
CCDC50-203ENST00000460064 RAPGEF4Q8WZA2 1011 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 FAM89AQ96GI7 184 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 PNKPQ96T60 521 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 SPATA5L1Q9BVQ7 753 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 MRPS18AQ9NVS2 196 aaKnown RBP6.6□□□□□ -1.35
CCDC50-203ENST00000460064 HDAC9Q9UKV0 1011 aa6.6□□□□□ -1.35
CCDC50-203ENST00000460064 MAGED2Q9UNF1 606 aaPredicted RBP6.6□□□□□ -1.35
CCDC50-203ENST00000460064 USP15Q9Y4E8 981 aaPredicted RBP6.6□□□□□ -1.35
CCDC50-203ENST00000460064 A0A1W2PPC4 97 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 KLRG2A4D1S0 409 aaPredicted RBP6.59□□□□□ -1.35
CCDC50-203ENST00000460064 MBD3L4A6NDZ8 208 aaPredicted RBP6.59□□□□□ -1.35
CCDC50-203ENST00000460064 MBD3L3A6NE82 208 aaPredicted RBP6.59□□□□□ -1.35
CCDC50-203ENST00000460064 PATE3B3GLJ2 98 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 CYP27B1O15528 508 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 ZNF623O75123 536 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 XRCC6P12956 609 aaKnown RBP eCLIP6.59□□□□□ -1.35
CCDC50-203ENST00000460064 ACO1P21399 889 aaKnown RBP6.59□□□□□ -1.35
CCDC50-203ENST00000460064 HSPA7P48741 367 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 STARD3Q14849 445 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 FAM102AQ5T9C2 384 aaPredicted RBP6.59□□□□□ -1.35
CCDC50-203ENST00000460064 C1QL3Q5VWW1 255 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 RRAGBQ5VZM2 374 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 GGT6Q6P531 493 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 Q6ZSN1 163 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 RHOT2Q8IXI1 618 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 ZNF808Q8N4W9 903 aaPredicted RBP6.59□□□□□ -1.35
CCDC50-203ENST00000460064 DNERQ8NFT8 737 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 SPSB4Q96A44 273 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 TRIB1Q96RU8 372 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 SSBP3Q9BWW4 388 aaPredicted RBP6.59□□□□□ -1.35
CCDC50-203ENST00000460064 ZSCAN32Q9NX65 697 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 ZNF212Q9UDV6 495 aa6.59□□□□□ -1.35
CCDC50-203ENST00000460064 EIF2B4Q9UI10 523 aaKnown RBP6.59□□□□□ -1.35
CCDC50-203ENST00000460064 AATKQ6ZMQ8 1374 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 XDHP47989 1333 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 ADAMTS3O15072 1205 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 CREB3O43889 395 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 NBNO60934 754 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 EEF1GP26641 437 aaKnown RBP6.58□□□□□ -1.36
CCDC50-203ENST00000460064 KLRC1P26715 233 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 APOBEC3AP31941 199 aaPredicted RBP6.58□□□□□ -1.36
CCDC50-203ENST00000460064 HALP42357 657 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 MAN2A2P49641 1150 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 RNASE9P60153 205 aaKnown RBP6.58□□□□□ -1.36
CCDC50-203ENST00000460064 ELF2Q15723 593 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 PDCD2Q16342 344 aaPredicted RBP6.58□□□□□ -1.36
CCDC50-203ENST00000460064 MPEG1Q2M385 716 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 SLC35G1Q2M3R5 365 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 HS1BP3Q53T59 392 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 INO80DQ53TQ3 878 aaPredicted RBP6.58□□□□□ -1.36
CCDC50-203ENST00000460064 AGAP9Q5VTM2 703 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 NAIF1Q69YI7 327 aaPredicted RBP6.58□□□□□ -1.36
CCDC50-203ENST00000460064 PGBD2Q6P3X8 592 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 CCDC174Q6PII3 467 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 FOXR2Q6PJQ5 311 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 ZDHHC24Q6UX98 284 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 MAMDC4Q6UXC1 1216 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.58□□□□□ -1.36
CCDC50-203ENST00000460064 Q6ZRM9 215 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 PPP1R32Q7Z5V6 425 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 LRRC46Q96FV0 321 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 TMEM41AQ96HV5 264 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 SLC46A1Q96NT5 459 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 MOGAT1Q96PD6 335 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 HERPUD2Q9BSE4 406 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 TTYH3Q9C0H2 523 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 MAN2B2Q9Y2E5 1009 aa6.58□□□□□ -1.36
CCDC50-203ENST00000460064 A0A087WV62 115 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 AREL1O15033 823 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 ZNF185O15231 689 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 PLA2G6O60733 806 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 TXNP10599 105 aaKnown RBP6.57□□□□□ -1.36
CCDC50-203ENST00000460064 CYP2C9P11712 490 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 SCNN1GP51170 649 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 TCF15Q12870 199 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 CRHR2Q13324 411 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 CNGB1Q14028 1251 aaPredicted RBP6.57□□□□□ -1.36
CCDC50-203ENST00000460064 BOP1Q14137 746 aaKnown RBP6.57□□□□□ -1.36
CCDC50-203ENST00000460064 SLC29A2Q14542 456 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 IQCB1Q15051 598 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms