RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 ANKLE1Q8NAG6 615 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 ZNF653Q96CK0 615 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 NT5C1AQ9BXI3 368 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 ZNF518BQ9C0D4 1074 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 TSPYL2Q9H2G4 693 aaPredicted RBP25.99■■□□□ 1.75
U2AF1-204ENST00000459639 DCDC2CA8MYV0 355 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 CYP1A2P05177 515 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 LBX1P52954 281 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 ATN1P54259 1190 aaPredicted RBP25.99■■□□□ 1.75
U2AF1-204ENST00000459639 GRIK3Q13003 919 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 PHF13Q86YI8 300 aaPredicted RBP25.99■■□□□ 1.75
U2AF1-204ENST00000459639 MCOLN2Q8IZK6 566 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 LRRC57Q8N9N7 239 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 CPA5Q8WXQ8 436 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 MRPL45Q9BRJ2 306 aaKnown RBP25.99■■□□□ 1.75
U2AF1-204ENST00000459639 OSGEPQ9NPF4 335 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 CDC23Q9UJX2 597 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 KIAA1257Q9ULG3 409 aa25.99■■□□□ 1.75
U2AF1-204ENST00000459639 SPTLC1O15269 473 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 MTA2O94776 668 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 VDRP11473 427 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 CDH5P33151 784 aaPredicted RBP25.98■■□□□ 1.75
U2AF1-204ENST00000459639 GJA8P48165 433 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 AFF1P51825 1210 aaKnown RBP25.98■■□□□ 1.75
U2AF1-204ENST00000459639 LILRA4P59901 499 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 FAM189BP81408 668 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 SOWAHAQ2M3V2 549 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 PLEKHG4Q58EX7 1191 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 MON1BQ7L1V2 547 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 LIMS2Q7Z4I7 341 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 UNC93AQ86WB7 457 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 SYCE1Q8N0S2 351 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 TMEM35BQ8NCS4 154 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 VCPIP1Q96JH7 1222 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 CTTNBP2NLQ9P2B4 639 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 CEP83Q9Y592 693 aa25.98■■□□□ 1.75
U2AF1-204ENST00000459639 FAM170AA1A519 330 aa25.97■■□□□ 1.75
U2AF1-204ENST00000459639 RPL9P32969 192 aaKnown RBP25.97■■□□□ 1.75
U2AF1-204ENST00000459639 CTCFP49711 727 aaPredicted RBP25.97■■□□□ 1.75
U2AF1-204ENST00000459639 GPNMBQ14956 572 aa25.97■■□□□ 1.75
U2AF1-204ENST00000459639 APBB2Q92870 758 aa25.97■■□□□ 1.75
U2AF1-204ENST00000459639 AVENQ9NQS1 362 aaPredicted RBP25.97■■□□□ 1.75
U2AF1-204ENST00000459639 SCN5AQ14524 2016 aa25.97■■□□□ 1.75
U2AF1-204ENST00000459639 SLU7O95391 586 aaKnown RBP25.96■■□□□ 1.75
U2AF1-204ENST00000459639 PARNO95453 639 aaKnown RBP25.96■■□□□ 1.75
U2AF1-204ENST00000459639 TRIM60Q495X7 471 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 DPH6Q7L8W6 267 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 SLFN11Q7Z7L1 901 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 TOP6BLQ8N6T0 577 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 SEPT8Q92599 483 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 LHX5Q9H2C1 402 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 HIPK3Q9H422 1215 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 UVRAGQ9P2Y5 699 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 SAR1BQ9Y6B6 198 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 PODXLO00592 558 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 FAM163BP0C2L3 166 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 SSTR3P32745 418 aaPredicted RBP25.96■■□□□ 1.75
U2AF1-204ENST00000459639 C1QBPQ07021 282 aaKnown RBP25.96■■□□□ 1.75
U2AF1-204ENST00000459639 FAAP100Q0VG06 881 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 ORC1Q13415 861 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 SGO2Q562F6 1265 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 APPL2Q8NEU8 664 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 CNOT8Q9UFF9 292 aaKnown RBP25.96■■□□□ 1.75
U2AF1-204ENST00000459639 SNX12Q9UMY4 172 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 COG5Q9UP83 839 aa25.96■■□□□ 1.75
U2AF1-204ENST00000459639 BRCA2P51587 3418 aa25.95■■□□□ 1.74
U2AF1-204ENST00000459639 ATMINO43313 823 aaPredicted RBP25.95■■□□□ 1.74
U2AF1-204ENST00000459639 HUS1O60921 280 aa25.95■■□□□ 1.74
U2AF1-204ENST00000459639 PRLRP16471 622 aa25.95■■□□□ 1.74
U2AF1-204ENST00000459639 IBSPP21815 317 aaPredicted RBP25.95■■□□□ 1.74
U2AF1-204ENST00000459639 TLE2Q04725 743 aa25.95■■□□□ 1.74
U2AF1-204ENST00000459639 MEI1Q5TIA1 1274 aa25.95■■□□□ 1.74
U2AF1-204ENST00000459639 DIS3LQ8TF46 1054 aaKnown RBP25.95■■□□□ 1.74
U2AF1-204ENST00000459639 KBTBD7Q8WVZ9 684 aa25.95■■□□□ 1.74
U2AF1-204ENST00000459639 HEXIM2Q96MH2 286 aaKnown RBP25.95■■□□□ 1.74
U2AF1-204ENST00000459639 TLR10Q9BXR5 811 aa25.95■■□□□ 1.74
U2AF1-204ENST00000459639 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.95■■□□□ 1.74
U2AF1-204ENST00000459639 FTCDO95954 541 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 GTF2F1P35269 517 aaKnown RBP eCLIP25.94■■□□□ 1.74
U2AF1-204ENST00000459639 TUSC3Q13454 348 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 STILQ15468 1287 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 CNGA2Q16280 664 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 WHAMMP3Q1A5X7 153 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 LIN9Q5TKA1 542 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 GLB1LQ6UWU2 654 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 C1orf131Q8NDD1 294 aaKnown RBP25.94■■□□□ 1.74
U2AF1-204ENST00000459639 DBF4BQ8NFT6 615 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 DDX27Q96GQ7 796 aaKnown RBP25.94■■□□□ 1.74
U2AF1-204ENST00000459639 UROC1Q96N76 676 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 NUP85Q9BW27 656 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 DNAI2Q9GZS0 605 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 ADAM22Q9P0K1 906 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 L1RE1Q9UN81 338 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 HYOU1Q9Y4L1 999 aa25.94■■□□□ 1.74
U2AF1-204ENST00000459639 O00370 1275 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 BUB1BO60566 1050 aaPredicted RBP25.93■■□□□ 1.74
U2AF1-204ENST00000459639 POMCP01189 267 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 MMP8P22894 467 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 CLCNKBP51801 687 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 PTP4A2Q12974 167 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms