RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 C2orf15Q8WU43 125 aaKnown RBP11.51□□□□□ -0.57
DDX39A-203ENST00000454233 LEO1Q8WVC0 666 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-203ENST00000454233 TCEAL4Q96EI5 215 aa11.51□□□□□ -0.57
DDX39A-203ENST00000454233 SHDQ96IW2 340 aa11.51□□□□□ -0.57
DDX39A-203ENST00000454233 TMEM209Q96SK2 561 aa11.51□□□□□ -0.57
DDX39A-203ENST00000454233 RPP25Q9BUL9 199 aaKnown RBP11.51□□□□□ -0.57
DDX39A-203ENST00000454233 MTMR12Q9C0I1 747 aa11.51□□□□□ -0.57
DDX39A-203ENST00000454233 ZCWPW1Q9H0M4 648 aa11.51□□□□□ -0.57
DDX39A-203ENST00000454233 ARHGEF3Q9NR81 526 aa11.51□□□□□ -0.57
DDX39A-203ENST00000454233 AGPAT3Q9NRZ7 376 aa11.51□□□□□ -0.57
DDX39A-203ENST00000454233 CGNQ9P2M7 1197 aaKnown RBP11.51□□□□□ -0.57
DDX39A-203ENST00000454233 HSFX1Q9UBD0 423 aa11.51□□□□□ -0.57
DDX39A-203ENST00000454233 SLC27A5Q9Y2P5 690 aa11.51□□□□□ -0.57
DDX39A-203ENST00000454233 ASB3Q9Y575 518 aa11.51□□□□□ -0.57
DDX39A-203ENST00000454233 NOTCH4Q99466 2003 aa11.51□□□□□ -0.57
DDX39A-203ENST00000454233 A0A1B0GVL5 298 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 ECI2O75521 394 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 VNN2O95498 520 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 FGF19O95750 216 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 PFKFB1P16118 471 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 NPR3P17342 541 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 HOXD11P31277 338 aaPredicted RBP11.5□□□□□ -0.57
DDX39A-203ENST00000454233 HOXD13P35453 343 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 CCR2P41597 374 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 CYP2J2P51589 502 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 EPHA5P54756 1037 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 TSPY1Q01534 308 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 EHHADHQ08426 723 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 TCF15Q12870 199 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 MYO1EQ12965 1108 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 BECN1Q14457 450 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 VEPH1Q14D04 833 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 DUOXA2Q1HG44 320 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 MGAT5BQ3V5L5 792 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 LMBRD2Q68DH5 695 aaPredicted RBP11.5□□□□□ -0.57
DDX39A-203ENST00000454233 PHLDB3Q6NSJ2 640 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 ITIH5Q86UX2 942 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 CBWD2Q8IUF1 395 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 GRAMD1CQ8IYS0 662 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 TMEM86AQ8N2M4 240 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 XXYLT1Q8NBI6 393 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 FAM200AQ8TCP9 573 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 SPPL2BQ8TCT7 592 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 SCFD1Q8WVM8 642 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 ELSPBP1Q96BH3 223 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 BORCS6Q96GS4 357 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 PAGE5Q96GU1 130 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 FNBP1Q96RU3 617 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 SEPT5Q99719 369 aaPredicted RBP11.5□□□□□ -0.57
DDX39A-203ENST00000454233 GPR88Q9GZN0 384 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 SCAND2PQ9GZW5 306 aaPredicted RBP11.5□□□□□ -0.57
DDX39A-203ENST00000454233 CRISPLD1Q9H336 500 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 SLITRK6Q9H5Y7 841 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 TBC1D17Q9HA65 648 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 ZFP14Q9HCL3 533 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 SLC39A2Q9NP94 309 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 EXOC1Q9NV70 894 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 INTS13Q9NVM9 706 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 ZDHHC9Q9Y397 364 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 TCHHQ07283 1943 aa11.5□□□□□ -0.57
DDX39A-203ENST00000454233 CLIC2O15247 247 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 TGFB1I1O43294 461 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 ACTN4O43707 911 aaKnown RBP11.49□□□□□ -0.57
DDX39A-203ENST00000454233 PRPF40AO75400 957 aaKnown RBP11.49□□□□□ -0.57
DDX39A-203ENST00000454233 MYL1P05976 194 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 SYKP43405 635 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 MYL7Q01449 175 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 PSMD2Q13200 908 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 TAF12Q16514 161 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 SNRNP35Q16560 246 aaKnown RBP11.49□□□□□ -0.57
DDX39A-203ENST00000454233 KNOP1Q1ED39 458 aaKnown RBP11.49□□□□□ -0.57
DDX39A-203ENST00000454233 BMT2Q1RMZ1 405 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 FAM78AQ5JUQ0 283 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 TANGO2Q6ICL3 276 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 WDR49Q8IV35 697 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 PDCL2Q8N4E4 241 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 TTC9BQ8N6N2 239 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 RDH13Q8NBN7 331 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 GOLGA5Q8TBA6 731 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 SPATA18Q8TC71 538 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 ATOH1Q92858 354 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-203ENST00000454233 SMARCD2Q92925 531 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 PSMG2Q969U7 264 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 CCDC47Q96A33 483 aaKnown RBP11.49□□□□□ -0.57
DDX39A-203ENST00000454233 DNAJC25Q9H1X3 360 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 GDAP2Q9NXN4 497 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 ABI2Q9NYB9 513 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-203ENST00000454233 SIX4Q9UIU6 781 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 L1RE1Q9UN81 338 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 PCDHB5Q9Y5E4 795 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 SNX9Q9Y5X1 595 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 TSC2P49815 1807 aa11.49□□□□□ -0.57
DDX39A-203ENST00000454233 A0A1W2PRU2 124 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 H0Y858 1186 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 PI15O43692 258 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 EXOC3O60645 756 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 MOSPD3O75425 235 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 SOAT2O75908 522 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 DLATP10515 647 aaKnown RBP11.48□□□□□ -0.57
DDX39A-203ENST00000454233 GJA1P17302 382 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms