RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 GRB14Q14449 540 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 SIX1Q15475 284 aaPredicted RBP12.49□□□□□ -0.41
VTA1-203ENST00000452973 ZSCAN26Q16670 478 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 RHOT1Q8IXI2 618 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 UBR7Q8N806 425 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
VTA1-203ENST00000452973 TWNKQ96RR1 684 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 CDHR5Q9HBB8 845 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 ASIC3Q9UHC3 531 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 KAT6AQ92794 2004 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 LOC102724159A0A0B4J2E5 919 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 ECEL1O95672 775 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 HNRNPH2P55795 449 aaKnown RBP12.49□□□□□ -0.41
VTA1-203ENST00000452973 PWP2Q15269 919 aaKnown RBP12.49□□□□□ -0.41
VTA1-203ENST00000452973 ADPGKQ9BRR6 497 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 LRRC4CQ9HCJ2 640 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 DNAJC17Q9NVM6 304 aaKnown RBP12.49□□□□□ -0.41
VTA1-203ENST00000452973 PSD3Q9NYI0 1048 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 PCYOX1Q9UHG3 505 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 DOCK3Q8IZD9 2030 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 PLXNA1Q9UIW2 1896 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 TSPAN1O60635 241 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 MYZAPP0CAP1 466 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 MCF2P10911 925 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 ACTN2P35609 894 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 CDR1P51861 262 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 TMEM132DQ14C87 1099 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 FAM110CQ1W6H9 321 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 GLRA4Q5JXX5 417 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.49□□□□□ -0.41
VTA1-203ENST00000452973 SEC14L1Q92503 715 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 KIF12Q96FN5 646 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 HPDLQ96IR7 371 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 ACAP3Q96P50 834 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 OSMRQ99650 979 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 PLXNB2O15031 1838 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 TLDC2A0PJX2 215 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 PODXLO00592 558 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 CYP2B6P20813 491 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 KRT17Q04695 432 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 TXNRD3NBQ6F5E7 133 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 ILDR2Q71H61 639 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 ANKS1BQ7Z6G8 1248 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 PRUNE1Q86TP1 453 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 HAUS1Q96CS2 278 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 VCPIP1Q96JH7 1222 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 HEXIM2Q96MH2 286 aaKnown RBP12.48□□□□□ -0.41
VTA1-203ENST00000452973 ZDHHC18Q9NUE0 388 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 GRHL1Q9NZI5 618 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 BHMG1C9JSJ3 638 aaPredicted RBP12.48□□□□□ -0.41
VTA1-203ENST00000452973 FSCN2O14926 492 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 NPTXRO95502 500 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 CALB1P05937 261 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 OGDHQ02218 1023 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 ZNF844Q08AG5 666 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 CCL14Q16627 93 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 KRT71Q3SY84 523 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 UBAP2Q5T6F2 1119 aaKnown RBP12.48□□□□□ -0.41
VTA1-203ENST00000452973 ZDHHC24Q6UX98 284 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 CATSPER4Q7RTX7 472 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 EMC1Q8N766 993 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 EIF1ADQ8N9N8 165 aaKnown RBP12.48□□□□□ -0.41
VTA1-203ENST00000452973 UBA3Q8TBC4 463 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 CAPS2Q9BXY5 557 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 CYTH4Q9UIA0 394 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 SLC45A1Q9Y2W3 748 aa12.48□□□□□ -0.41
VTA1-203ENST00000452973 MGAMO43451 1857 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 PASKQ96RG2 1323 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 RBM47A0AV96 593 aaKnown RBP12.47□□□□□ -0.41
VTA1-203ENST00000452973 RAD23BP54727 409 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 GNGT1P63211 74 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 BEX3Q00994 111 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 PDCLQ13371 301 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 PTPN20Q4JDL3 420 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 FOXR1Q6PIV2 292 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 LINC01465Q8N7H1 131 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 NFKBIZQ9BYH8 718 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 OSBPL8Q9BZF1 889 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.47□□□□□ -0.41
VTA1-203ENST00000452973 SNTG2Q9NY99 539 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 IP6K2Q9UHH9 426 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 TMEM191CA6NGB0 347 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 KRT1P04264 644 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 RFC1P35251 1148 aaPredicted RBP12.47□□□□□ -0.41
VTA1-203ENST00000452973 PSMC4P43686 418 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 ZNF157P51786 506 aaPredicted RBP12.47□□□□□ -0.41
VTA1-203ENST00000452973 ADCY2Q08462 1091 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 ZNF252P-AS1Q0IIN9 211 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 CALCOCO2Q13137 446 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 SMTNL2Q2TAL5 461 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 CST9Q5W186 159 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
VTA1-203ENST00000452973 EMID1Q96A84 441 aaPredicted RBP12.47□□□□□ -0.41
VTA1-203ENST00000452973 ATP6V1G3Q96LB4 118 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 DPP3Q9NY33 737 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 FLRT1Q9NZU1 646 aa12.47□□□□□ -0.41
VTA1-203ENST00000452973 SHBGP04278 402 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 PMS2P54278 862 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 PSMC1P62191 440 aaKnown RBP12.46□□□□□ -0.41
VTA1-203ENST00000452973 YWHAEP62258 255 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms