RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 TMEM189-UBE2V1I3L0A0 370 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 SPINT1O43278 529 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 ABLIM3O94929 683 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 CYP3A4P08684 503 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 SERPINF2P08697 491 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 MYL4P12829 197 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 BCKDHBP21953 392 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 ADD1P35611 737 aaKnown RBP8.73□□□□□ -1.01
LINC01961-201ENST00000449954 GMPRP36959 345 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 CSRP3P50461 194 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 INSM1Q01101 510 aaPredicted RBP8.73□□□□□ -1.01
LINC01961-201ENST00000449954 TEAD2Q15562 447 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 UGCGQ16739 394 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 DUOXA1Q1HG43 343 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.73□□□□□ -1.01
LINC01961-201ENST00000449954 LYSMD4Q5XG99 296 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 GPR155Q7Z3F1 870 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 RASSF3Q86WH2 238 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 NAXDQ8IW45 347 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 EXOC8Q8IYI6 725 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 RPLP0P6Q8NHW5 317 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 CCDC26Q8TAB7 109 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 PSPC1Q8WXF1 523 aaKnown RBP8.73□□□□□ -1.01
LINC01961-201ENST00000449954 WBP1Q96G27 269 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 ZFYVE19Q96K21 471 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 CNOT6LQ96LI5 555 aaKnown RBP8.73□□□□□ -1.01
LINC01961-201ENST00000449954 MINDY3Q9H8M7 445 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 CYP4F11Q9HBI6 524 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 THG1LQ9NWX6 298 aaKnown RBP8.73□□□□□ -1.01
LINC01961-201ENST00000449954 MAFFQ9ULX9 164 aa8.73□□□□□ -1.01
LINC01961-201ENST00000449954 PCDH15Q96QU1 1955 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 MUC22E2RYF6 1773 aaPredicted RBP8.72□□□□□ -1.01
LINC01961-201ENST00000449954 TRABD2BA6NFA1 517 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 B8ZZF3 427 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 RRP8O43159 456 aaKnown RBP8.72□□□□□ -1.01
LINC01961-201ENST00000449954 TRAPPC3O43617 180 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 SH3BP5O60239 455 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 TSPAN1O60635 241 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 PLEKHA8P1O95397 391 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 EGFP01133 1207 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 SYPP08247 313 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 MCM2P49736 904 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 ADCY7P51828 1080 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 NAPAP54920 295 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 TNK2Q07912 1038 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 TPGS2Q68CL5 300 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 RALYLQ86SE5 291 aaKnown RBP8.72□□□□□ -1.01
LINC01961-201ENST00000449954 ARID3BQ8IVW6 561 aaPredicted RBP8.72□□□□□ -1.01
LINC01961-201ENST00000449954 ZNF654Q8IZM8 581 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 SRBD1Q8N5C6 995 aaKnown RBP8.72□□□□□ -1.01
LINC01961-201ENST00000449954 RDM1Q8NG50 284 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 SHKBP1Q8TBC3 707 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 CRYGNQ8WXF5 182 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 SLC7A3Q8WY07 619 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 INSM2Q96T92 566 aaPredicted RBP8.72□□□□□ -1.01
LINC01961-201ENST00000449954 TPSD1Q9BZJ3 242 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 CAPN10Q9HC96 672 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 CYLDQ9NQC7 956 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 TMEM74BQ9NUR3 256 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 CACNG4Q9UBN1 327 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 PILRBQ9UKJ0 227 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 INVSQ9Y283 1065 aa8.72□□□□□ -1.01
LINC01961-201ENST00000449954 KIF26AQ9ULI4 1882 aaPredicted RBP8.72□□□□□ -1.01
LINC01961-201ENST00000449954 RELNP78509 3460 aa8.71□□□□□ -1.01
LINC01961-201ENST00000449954 hCG_1984214I3L0E3 225 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 LILRA1O75019 489 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 PRKCBP05771 671 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 SRGAP2CP0DJJ0 459 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 GJA1P17302 382 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 AKAP5P24588 427 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 ITPKBP27987 946 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 CTSOP43234 321 aaPredicted RBP8.71□□□□□ -1.02
LINC01961-201ENST00000449954 MCCD1P59942 119 aaPredicted RBP8.71□□□□□ -1.02
LINC01961-201ENST00000449954 TAF1BQ53T94 588 aaPredicted RBP8.71□□□□□ -1.02
LINC01961-201ENST00000449954 PCSK4Q6UW60 755 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 PLEKHM2Q8IWE5 1019 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 ZNF713Q8N859 430 aaPredicted RBP8.71□□□□□ -1.02
LINC01961-201ENST00000449954 DAGLBQ8NCG7 672 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 BPIFB1Q8TDL5 484 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 CAMK1GQ96NX5 476 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 RIT2Q99578 217 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 POLR3BQ9NW08 1133 aaPredicted RBP8.71□□□□□ -1.02
LINC01961-201ENST00000449954 PPME1Q9Y570 386 aa8.71□□□□□ -1.02
LINC01961-201ENST00000449954 KIAA1549LQ6ZVL6 1849 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 NOTCH2Q04721 2471 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 A0A1W2PRU2 124 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 ASAP2O43150 1006 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 ALDH1A2O94788 518 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 FGF19O95750 216 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 THP07101 528 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 CALM1P0DP23 149 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 CALM2P0DP24 149 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 CALM3P0DP25 149 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 C6P13671 934 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 HLA-EP13747 358 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 SDSP20132 328 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 TKTP29401 623 aaKnown RBP8.7□□□□□ -1.02
LINC01961-201ENST00000449954 WEE1P30291 646 aa8.7□□□□□ -1.02
LINC01961-201ENST00000449954 EIF2S3P41091 472 aaKnown RBP8.7□□□□□ -1.02
LINC01961-201ENST00000449954 P2RY2P41231 377 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms