RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ARHGAP33O14559 1287 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 ALDH1A2O94788 518 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 ITPKAP23677 461 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 MARCKSP29966 332 aaPredicted RBP13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 P2RY2P41231 377 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 CTTNQ14247 550 aaKnown RBP13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 CC2D1AQ6P1N0 951 aaPredicted RBP13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 MOXD1Q6UVY6 613 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 TMPRSS7Q7RTY8 843 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 SLCO6A1Q86UG4 719 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 ZBTB8OSQ8IWT0 167 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 TPH2Q8IWU9 490 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 MDGA1Q8NFP4 955 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 BEST2Q8NFU1 509 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 OLIG1Q8TAK6 271 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 PIP4K2CQ8TBX8 421 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 EZH1Q92800 747 aaPredicted RBP13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 CD101Q93033 1021 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 DYDC2Q96IM9 177 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 SPACA7Q96KW9 195 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 TBC1D32Q96NH3 1257 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 DCBLD2Q96PD2 775 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 PGLYRP2Q96PD5 576 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 POLR3FQ9H1D9 316 aaPredicted RBP13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 SLC38A7Q9NVC3 462 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 DNAAF2Q9NVR5 837 aaKnown RBP13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 KIAA1522Q9P206 1035 aaPredicted RBP13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 ATXN2Q99700 1313 aaKnown RBP13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 TRIP11Q15643 1979 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 GOLGA4Q13439 2230 aaKnown RBP13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 KLF18A0A0U1RQI7 1052 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 MARCH6O60337 910 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 SYPP08247 313 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 ARSAP15289 507 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 GJA4P35212 333 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 NLRP5P59047 1200 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 SOX4Q06945 474 aaPredicted RBP13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 BYSLQ13895 437 aaKnown RBP13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 NAIF1Q69YI7 327 aaPredicted RBP13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 ITIH5Q86UX2 942 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 OR2I1PQ8NGU4 316 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 DDX12PQ92771 950 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 PSMG2Q969U7 264 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 SUSD3Q96L08 255 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 SLC46A2Q9BY10 475 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 CAPN10Q9HC96 672 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 DAXXQ9UER7 740 aaPredicted RBP13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 USP20Q9Y2K6 914 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 SLC27A5Q9Y2P5 690 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 PTPRBP23467 1997 aa13.78□□□□□ -0.2
AC004540.1-204ENST00000449537 VNN2O95498 520 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 GSPT1P15170 499 aaKnown RBP13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 RPL9P32969 192 aaKnown RBP13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 RCAN1P53805 252 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 CYP4F8P98187 520 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 EXOSC10Q01780 885 aaKnown RBP13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 KCNC4Q03721 635 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 NBR1Q14596 966 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 PDGFRLQ15198 375 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 DCAF4L1Q3SXM0 396 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 C2orf27AQ580R0 203 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 TTC22Q5TAA0 569 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 PEAR1Q5VY43 1037 aaPredicted RBP13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 EEF1DP3Q658K8 133 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 CREB3L3Q68CJ9 461 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 RABEPKQ7Z6M1 372 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 CMTM8Q8IZV2 173 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 FRMD1Q8N878 549 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 USP33Q8TEY7 942 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 TCEANC2Q96MN5 208 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 KIF2CQ99661 725 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 CRISPLD1Q9H336 500 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 PRORYQ9H606 182 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 ANKEF1Q9NU02 776 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 VPS54Q9P1Q0 977 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 ZMYM5Q9UJ78 669 aa13.77□□□□□ -0.21
AC004540.1-204ENST00000449537 ACKR2O00590 384 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 SLC37A4O43826 429 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 SLITRK3O94933 977 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 LIG1P18858 919 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 CDC25CP30307 473 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 MCM4P33991 863 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 AVPR1AP37288 418 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 YARSP54577 528 aaKnown RBP13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 CFHR1Q03591 330 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 BFSP1Q12934 665 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 CRY1Q16526 586 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 CDCA2Q69YH5 1023 aaPredicted RBP13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 CENPPQ6IPU0 288 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 GLRX5Q86SX6 157 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 NAXDQ8IW45 347 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 CPA6Q8N4T0 437 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 CCDC33Q8N5R6 958 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 WHAMMQ8TF30 809 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 CCDC43Q96MW1 224 aaKnown RBP13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 GCNAQ96QF7 691 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 OXCT2Q9BYC2 517 aaPredicted RBP13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 C2orf40Q9H1Z8 148 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 ECT2Q9H8V3 914 aa13.76□□□□□ -0.21
AC004540.1-204ENST00000449537 TNRC6BQ9UPQ9 1833 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms