RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 CPB1P15086 417 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 CCR2P41597 374 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 CYP2J2P51589 502 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 MCCD1P59942 119 aaPredicted RBP15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 CLDN10P78369 228 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 SV2CQ496J9 727 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 TRAPPC11Q7Z392 1133 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 WDR49Q8IV35 697 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 NPAS3Q8IXF0 933 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 PBXIP1Q96AQ6 731 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 DNAJC25Q9H1X3 360 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 EXOC1Q9NV70 894 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 HSFX1Q9UBD0 423 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 L1RE1Q9UN81 338 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 SLC27A5Q9Y2P5 690 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 ARIH1Q9Y4X5 557 aaPredicted RBP15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 PDGFBP01127 241 aaPredicted RBP15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 LRG1P02750 347 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 KCNB1Q14721 858 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 SOWAHAQ2M3V2 549 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 PARM1Q6UWI2 310 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 GET4Q7L5D6 327 aaPredicted RBP15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 HS6ST3Q8IZP7 471 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 PDCL2Q8N4E4 241 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 TTC9BQ8N6N2 239 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 GOLGA5Q8TBA6 731 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 NOC3LQ8WTT2 800 aaKnown RBP15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 FGF14Q92915 247 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 TCEAL4Q96EI5 215 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 ZNF560Q96MR9 790 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 PGLYRP2Q96PD5 576 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 PKMYT1Q99640 499 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 TRAF3IP3Q9Y228 551 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 F5P12259 2224 aa15.15■□□□□ 0.02
RTFDC1-204ENST00000449062 NARSO43776 548 aaKnown RBP15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 TMEM191BP0C7N4 346 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 TWF1Q12792 350 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 DPH6Q7L8W6 267 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 OSTM1Q86WC4 334 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 METTL23Q86XA0 190 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 THEM5Q8N1Q8 247 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 FBXL6Q8N531 539 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 ST13P5Q8NFI4 369 aaPredicted RBP15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 SPATA20Q8TB22 786 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 SPATA18Q8TC71 538 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 PARD3BQ8TEW8 1205 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 CCDC127Q96BQ5 260 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 HPDLQ96IR7 371 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 ANKRD36BP1Q96IX9 119 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 CGRRF1Q99675 332 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 ACBD6Q9BR61 282 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 CORO1BQ9BR76 489 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 TMLHEQ9NVH6 421 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 GDE1Q9NZC3 331 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 DUSP12Q9UNI6 340 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 MRPS23Q9Y3D9 190 aaKnown RBP15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 YIPF1Q9Y548 306 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 WDFY4Q6ZS81 3184 aa15.14■□□□□ 0.01
RTFDC1-204ENST00000449062 EXOC3O60645 756 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 HUS1O60921 280 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 NPR3P17342 541 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 CASP4P49662 377 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 SMARCB1Q12824 385 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 BFSP1Q12934 665 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 SLC39A12Q504Y0 691 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 C1orf220Q5T0J3 134 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 TMC8Q8IU68 726 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 TMEM86AQ8N2M4 240 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 GUF1Q8N442 669 aaKnown RBP15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 TOP6BLQ8N6T0 577 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 KBTBD7Q8WVZ9 684 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 ZNF512Q96ME7 567 aaPredicted RBP15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 XYLT2Q9H1B5 865 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 SNX9Q9Y5X1 595 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 NUMBLQ9Y6R0 609 aa15.13■□□□□ 0.01
RTFDC1-204ENST00000449062 PRPF40AO75400 957 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 SOAT2O75908 522 aa15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 STAU1O95793 577 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 TNNC2P02585 160 aa15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 C4BPAP04003 597 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 KRT19P08727 400 aa15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 FAM163BP0C2L3 166 aa15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 DLATP10515 647 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 CEBPBP17676 345 aa15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 NFIL3Q16649 462 aa15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 ZCWPW2Q504Y3 356 aa15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 DNAJB7Q7Z6W7 309 aaPredicted RBP15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 ING5Q8WYH8 240 aa15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 MCRS1Q96EZ8 462 aa15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 ZSWIM3Q96MP5 696 aa15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 SLC2A4RGQ9NR83 387 aa15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 WNT16Q9UBV4 365 aa15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 CIZ1Q9ULV3 898 aaPredicted RBP15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 ASB3Q9Y575 518 aa15.12■□□□□ 0.01
RTFDC1-204ENST00000449062 LRRIQ3A6PVS8 624 aaPredicted RBP15.11■□□□□ 0.01
RTFDC1-204ENST00000449062 TULP1O00294 542 aaPredicted RBP15.11■□□□□ 0.01
RTFDC1-204ENST00000449062 ZNF197O14709 1029 aa15.11■□□□□ 0.01
RTFDC1-204ENST00000449062 HCRTO43612 131 aa15.11■□□□□ 0.01
RTFDC1-204ENST00000449062 NR3C1P04150 777 aa15.11■□□□□ 0.01
RTFDC1-204ENST00000449062 HAPLN1P10915 354 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms