RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 ZSCAN5CA6NGD5 496 aaPredicted RBP18.82■□□□□ 0.6
LMNA-208ENST00000448611 YARSP54577 528 aaKnown RBP18.82■□□□□ 0.6
LMNA-208ENST00000448611 CAP1Q01518 475 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 GUCY2DQ02846 1103 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 TRIM32Q13049 653 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 TAF2Q6P1X5 1199 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 SLC4A11Q8NBS3 891 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 ELOVL4Q9GZR5 314 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 SLITRK6Q9H5Y7 841 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 CNTN3Q9P232 1028 aa18.82■□□□□ 0.6
LMNA-208ENST00000448611 PIN4Q9Y237 131 aaKnown RBP18.82■□□□□ 0.6
LMNA-208ENST00000448611 TCRBV5S1A1TA0A578 114 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 SEPT4O43236 478 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 MED7O43513 233 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 PROSCO94903 275 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 PGK1P00558 417 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 CALB1P05937 261 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 PYGMP11217 842 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 CD19P15391 556 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 UBXN11Q5T124 520 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 DENND1BQ6P3S1 775 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 CXCL17Q6UXB2 119 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 TRIM6Q9C030 488 aaPredicted RBP18.81■□□□□ 0.6
LMNA-208ENST00000448611 LHX5Q9H2C1 402 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 FAM124BQ9H5Z6 455 aaPredicted RBP18.81■□□□□ 0.6
LMNA-208ENST00000448611 EPB41L5Q9HCM4 733 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 PARVAQ9NVD7 372 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 WBP1LQ9NX94 342 aa18.81■□□□□ 0.6
LMNA-208ENST00000448611 BHMG1C9JSJ3 638 aaPredicted RBP18.8■□□□□ 0.6
LMNA-208ENST00000448611 RECQL4O94761 1208 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 RWDD2BP57060 319 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 INCA1Q0VD86 236 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 TMEM176AQ96HP8 235 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 PLEKHA4Q9H4M7 779 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 GTF2IRD1Q9UHL9 959 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 SCN10AQ9Y5Y9 1956 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 ESYT3A0FGR9 886 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 PTPN11Q06124 597 aaPredicted RBP18.8■□□□□ 0.6
LMNA-208ENST00000448611 CACNB2Q08289 660 aaPredicted RBP18.8■□□□□ 0.6
LMNA-208ENST00000448611 ORC1Q13415 861 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 NBPF20Q3BBV1 942 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 SEL1L2Q5TEA6 688 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 FEZF2Q8TBJ5 459 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 CELF4Q9BZC1 486 aaKnown RBP18.8■□□□□ 0.6
LMNA-208ENST00000448611 TUBGCP4Q9UGJ1 667 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 CEP83Q9Y592 693 aa18.8■□□□□ 0.6
LMNA-208ENST00000448611 TLR3O15455 904 aaKnown RBP18.79■□□□□ 0.6
LMNA-208ENST00000448611 RARBP10826 455 aa18.79■□□□□ 0.6
LMNA-208ENST00000448611 AKAP5P24588 427 aa18.79■□□□□ 0.6
LMNA-208ENST00000448611 CARSP49589 748 aaKnown RBP18.79■□□□□ 0.6
LMNA-208ENST00000448611 EPHB4P54760 987 aa18.79■□□□□ 0.6
LMNA-208ENST00000448611 MYO1EQ12965 1108 aa18.79■□□□□ 0.6
LMNA-208ENST00000448611 CASKIN2Q8WXE0 1202 aa18.79■□□□□ 0.6
LMNA-208ENST00000448611 GDAP1L1Q96MZ0 367 aa18.79■□□□□ 0.6
LMNA-208ENST00000448611 VIPAS39Q9H9C1 493 aa18.79■□□□□ 0.6
LMNA-208ENST00000448611 SPC25Q9HBM1 224 aa18.79■□□□□ 0.6
LMNA-208ENST00000448611 ERVK-5Q9HDB9 667 aa18.79■□□□□ 0.6
LMNA-208ENST00000448611 AMACRQ9UHK6 382 aa18.79■□□□□ 0.6
LMNA-208ENST00000448611 BARX2Q9UMQ3 279 aaPredicted RBP18.79■□□□□ 0.6
LMNA-208ENST00000448611 GOLGA6L10A0A0M3HER8 536 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 ADAMTS4O75173 837 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 GJB6O95452 261 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 TNNT3P45378 269 aaPredicted RBP18.78■□□□□ 0.6
LMNA-208ENST00000448611 PPP2R5EQ16537 467 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 ADAT2Q7Z6V5 191 aaKnown RBP18.78■□□□□ 0.6
LMNA-208ENST00000448611 ERICH1Q86X53 443 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 ZDHHC14Q8IZN3 488 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 TTC39CQ8N584 583 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 C18orf25Q96B23 403 aaPredicted RBP18.78■□□□□ 0.6
LMNA-208ENST00000448611 CYTH4Q9UIA0 394 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 TRIP11Q15643 1979 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 TMEM191CA6NGB0 347 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 PPEF2O14830 753 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 SMC1AQ14683 1233 aaKnown RBP18.78■□□□□ 0.6
LMNA-208ENST00000448611 XKR4Q5GH76 650 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 GLRA4Q5JXX5 417 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 PPP1R15BQ5SWA1 713 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 GDF6Q6KF10 455 aaPredicted RBP18.78■□□□□ 0.6
LMNA-208ENST00000448611 EMBQ6PCB8 327 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 FAM228AQ86W67 206 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 SLC13A5Q86YT5 568 aaPredicted RBP18.78■□□□□ 0.6
LMNA-208ENST00000448611 LRRC52Q8N7C0 313 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 BEST2Q8NFU1 509 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 CCDC26Q8TAB7 109 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 ZNF296Q8WUU4 475 aaPredicted RBP18.78■□□□□ 0.6
LMNA-208ENST00000448611 DDX27Q96GQ7 796 aaKnown RBP18.78■□□□□ 0.6
LMNA-208ENST00000448611 APOL6Q9BWW8 343 aa18.78■□□□□ 0.6
LMNA-208ENST00000448611 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.78■□□□□ 0.6
LMNA-208ENST00000448611 CASP8AP2Q9UKL3 1982 aa18.77■□□□□ 0.6
LMNA-208ENST00000448611 MAN1A1P33908 653 aa18.77■□□□□ 0.6
LMNA-208ENST00000448611 NDST1P52848 882 aa18.77■□□□□ 0.6
LMNA-208ENST00000448611 RPL7AP62424 266 aaKnown RBP18.77■□□□□ 0.6
LMNA-208ENST00000448611 MRPS6P82932 125 aaKnown RBP18.77■□□□□ 0.6
LMNA-208ENST00000448611 TRADDQ15628 312 aa18.77■□□□□ 0.6
LMNA-208ENST00000448611 PTPN20Q4JDL3 420 aa18.77■□□□□ 0.6
LMNA-208ENST00000448611 DNAJC24Q6P3W2 148 aa18.77■□□□□ 0.6
LMNA-208ENST00000448611 MAATS1Q7Z4T9 603 aa18.77■□□□□ 0.6
LMNA-208ENST00000448611 PRELID2Q8N945 189 aa18.77■□□□□ 0.6
LMNA-208ENST00000448611 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.77■□□□□ 0.6
LMNA-208ENST00000448611 CD99L2Q8TCZ2 262 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms