RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 CCDC60Q8IWA6 550 aaPredicted RBP9.64□□□□□ -0.87
SMC6-207ENST00000448223 CPXCR1Q8N123 301 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 MDM1Q8TC05 714 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 UBXN6Q9BZV1 441 aa9.64□□□□□ -0.87
SMC6-207ENST00000448223 DHX36Q9H2U1 1008 aaKnown RBP9.64□□□□□ -0.87
SMC6-207ENST00000448223 A0A1W2PQC6 194 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 CNOT3O75175 753 aaKnown RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 MYL1P05976 194 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 FAM153BP0C7A2 387 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 JAK1P23458 1154 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 ITKQ08881 620 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 KCNH2Q12809 1159 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 GRM4Q14833 912 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 TBCCQ15814 346 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 FAM153CQ494X1 144 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 ZNF746Q6NUN9 644 aaPredicted RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 SCUBE1Q8IWY4 988 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 C19orf18Q8NEA5 215 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 SNF8Q96H20 258 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 ARHGEF3Q9NR81 526 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 MAD2L2Q9UI95 211 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 LDHAP00338 332 aaKnown RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 CCDC130P13994 396 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 OLR1P78380 273 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 SCRN3Q0VDG4 424 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 PPP1R2P3Q6NXS1 205 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 LVRNQ6Q4G3 990 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 BNIPLQ7Z465 357 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 KIAA0895Q8NCT3 520 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 UBASH3BQ8TF42 649 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 STK32AQ8WU08 396 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 CNDP1Q96KN2 507 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 CELF4Q9BZC1 486 aaKnown RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 APPL1Q9UKG1 709 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 PDS5AQ29RF7 1337 aaKnown RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 A0A087X0T9 212 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 ARPC4-TTLL3A0A0A6YYG9 625 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 SPDYE16A6NNV3 312 aaPredicted RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 CENPXA8MT69 81 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 RAD51BO15315 384 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 KLHL18O94889 574 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 TJP3O95049 919 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 FAM228BP0C875 321 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 P4HA1P13674 534 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 ATF4P18848 351 aaPredicted RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 TCN1P20061 433 aaPredicted RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 CCNCP24863 283 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 CASP5P51878 434 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 TP53BP2Q13625 1128 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 SPDYE2Q495Y8 402 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 KLHL17Q6TDP4 642 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 UNC13DQ70J99 1090 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 KCNK18Q7Z418 384 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 ZBED8Q8IZ13 594 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 TSEN2Q8NCE0 465 aaKnown RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 ALKBH8Q96BT7 664 aaKnown RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 NT5C1BQ96P26 610 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 ROPN1BQ9BZX4 212 aaPredicted RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 ROPN1Q9HAT0 212 aaPredicted RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 ATRNO75882 1429 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 SCN11AQ9UI33 1791 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 PDE9AO76083 593 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 GLI1P08151 1106 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 RASA1P20936 1047 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 LONRF1Q17RB8 773 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 CYP4A22Q5TCH4 519 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 CCDC137Q6PK04 289 aaKnown RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 FAF2Q96CS3 445 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 AK8Q96MA6 479 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 CITED4Q96RK1 184 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 DNAJC7Q99615 494 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 TINF2Q9BSI4 451 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 C1orf50Q9BV19 199 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 APOL6Q9BWW8 343 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 CALN1Q9BXU9 219 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 DBNDD1Q9H9R9 158 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 METTL5Q9NRN9 209 aaKnown RBP9.63□□□□□ -0.87
SMC6-207ENST00000448223 SELENONQ9NZV5 590 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 KIF1AQ12756 1690 aa9.63□□□□□ -0.87
SMC6-207ENST00000448223 SMIM31A0A1B0GVY4 71 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 SPDYE2BA6NHP3 402 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 OATP04181 439 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 SPDYE6P0CI01 402 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 PLCG2P16885 1265 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 CALB2P22676 271 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 ABATP80404 500 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 FUT2Q10981 343 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 TAF12Q16514 161 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 ZNF507Q8TCN5 953 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 NLRP4Q96MN2 994 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 LIN7AO14910 233 aaPredicted RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 ANGPT2O15123 496 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 ALOX15P16050 662 aaPredicted RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 PTPN4P29074 926 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 COPAP53621 1224 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 ATN1P54259 1190 aaPredicted RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 AMPD2Q01433 879 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 PDIA2Q13087 525 aaKnown RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 KRT27Q7Z3Y8 459 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 RYBPQ8N488 228 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms