RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 ZNF268Q14587 947 aaPredicted RBP13.63□□□□□ -0.23
SHC1-210ENST00000448116 MTFR1Q15390 333 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 GALNTL6Q49A17 601 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 FAM182AQ5T1J6 154 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 CYP4A22Q5TCH4 519 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 HHATQ5VTY9 493 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 DNAJC24Q6P3W2 148 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 ZCCHC9Q8N567 271 aaKnown RBP13.63□□□□□ -0.23
SHC1-210ENST00000448116 KCNV2Q8TDN2 545 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 RSRC1Q96IZ7 334 aaKnown RBP13.63□□□□□ -0.23
SHC1-210ENST00000448116 KIAA1586Q9HCI6 787 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 IP6K2Q9UHH9 426 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 TJP3O95049 919 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 EGFRP00533 1210 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 KLRC2P26717 231 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 SEPT7Q16181 437 aaKnown RBP13.63□□□□□ -0.23
SHC1-210ENST00000448116 PRAMEF18Q5VWM3 479 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 C15orf39Q6ZRI6 1047 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 ASAP3Q8TDY4 903 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 HAPLN2Q9GZV7 340 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 ZWILCHQ9H900 591 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 ARHGAP28Q9P2N2 729 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 LGALS13Q9UHV8 139 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 PHTF1Q9UMS5 762 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 AGTPBP1Q9UPW5 1226 aa13.63□□□□□ -0.23
SHC1-210ENST00000448116 COL2A1P02458 1487 aaPredicted RBP13.63□□□□□ -0.23
SHC1-210ENST00000448116 A0A1W2PPM1 405 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 DNALI1O14645 258 aaPredicted RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 CDC25CP30307 473 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 LMNB2Q03252 620 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 CXCL9Q07325 125 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 MKRN3Q13064 507 aaKnown RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 PLEKHA7Q6IQ23 1121 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 RCOR2Q8IZ40 523 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 NSUN6Q8TEA1 469 aaKnown RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 MAML1Q92585 1016 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 TMEM237Q96Q45 408 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 SLC24A3Q9HC58 644 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 RBBP6Q7Z6E9 1792 aaKnown RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 GOLGA8RI6L899 631 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 PLSCR1O15162 318 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 STBD1O95210 358 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 KCNA2P16389 499 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 TARSP26639 723 aaKnown RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 RPA3P35244 121 aaPredicted RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 ATP11AP98196 1134 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 SPARCL1Q14515 664 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 SMTNL2Q2TAL5 461 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 TRIM72Q6ZMU5 477 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 TRABD2AQ86V40 505 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 LRRC8CQ8TDW0 803 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 RBM41Q96IZ5 413 aaKnown RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 KLF6Q99612 283 aaPredicted RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 MYLK2Q9H1R3 596 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 TCEA3O75764 348 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 RGS20O76081 388 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 CST3P01034 146 aaPredicted RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 WEE2P0C1S8 567 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 SARNPP82979 210 aaKnown RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 CRELD2Q6UXH1 353 aaPredicted RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 ERICH1Q86X53 443 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 GPRASP2Q96D09 838 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 ZNF668Q96K58 619 aaPredicted RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 SLITRK1Q96PX8 696 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 ALG13Q9NP73 1137 aaKnown RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 NOP53Q9NZM5 478 aaKnown RBP13.62□□□□□ -0.23
SHC1-210ENST00000448116 PRKAG3Q9UGI9 489 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 HAO1Q9UJM8 370 aa13.62□□□□□ -0.23
SHC1-210ENST00000448116 EIF4E1BA6NMX2 242 aaKnown RBP13.61□□□□□ -0.23
SHC1-210ENST00000448116 ATP2A1O14983 1001 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 PTP4A2Q12974 167 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 KCNT1Q5JUK3 1230 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 FKBP1CQ5VVH2 108 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 RDM1Q8NG50 284 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 MYOZ2Q9NPC6 264 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 GAD2Q05329 585 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 RIPK1Q13546 671 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 XKR3Q5GH77 459 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 SYCP2LQ5T4T6 812 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 SPOCD1Q6ZMY3 1216 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 RINLQ6ZS11 566 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 PHF13Q86YI8 300 aaPredicted RBP13.61□□□□□ -0.23
SHC1-210ENST00000448116 RTKN2Q8IZC4 609 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 C12orf65Q9H3J6 166 aaKnown RBP13.61□□□□□ -0.23
SHC1-210ENST00000448116 MAP3K20Q9NYL2 800 aaKnown RBP13.61□□□□□ -0.23
SHC1-210ENST00000448116 ZNRF3Q9ULT6 936 aa13.61□□□□□ -0.23
SHC1-210ENST00000448116 A0A1B0GUA9 196 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 H0YCG3 227 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 CD19P15391 556 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 GLRA2P23416 452 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 SSTR1P30872 391 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 HMGCS2P54868 508 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 OSTNP61366 133 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 C1QBPQ07021 282 aaKnown RBP13.6□□□□□ -0.23
SHC1-210ENST00000448116 SLC1A5Q15758 541 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 SLC7A3Q8WY07 619 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 LRRC37BQ96QE4 947 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 NEFHP12036 1026 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 TNFSF9P41273 254 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 OGDHQ02218 1023 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms