RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 MRPL42Q9Y6G3 142 aaKnown RBP20.85■□□□□ 0.93
SGCE-207ENST00000447873 NT5C1B-RDH14C9J2C7 533 aa20.84■□□□□ 0.93
SGCE-207ENST00000447873 FAM163BP0C2L3 166 aa20.84■□□□□ 0.93
SGCE-207ENST00000447873 CYP11B1P15538 503 aa20.84■□□□□ 0.93
SGCE-207ENST00000447873 GNL1P36915 607 aaPredicted RBP20.84■□□□□ 0.93
SGCE-207ENST00000447873 ZNF132P52740 706 aa20.84■□□□□ 0.93
SGCE-207ENST00000447873 NDST1P52848 882 aa20.84■□□□□ 0.93
SGCE-207ENST00000447873 C9orf50Q5SZB4 431 aa20.84■□□□□ 0.93
SGCE-207ENST00000447873 WHAMMQ8TF30 809 aa20.84■□□□□ 0.93
SGCE-207ENST00000447873 RNPC3Q96LT9 517 aaKnown RBP20.84■□□□□ 0.93
SGCE-207ENST00000447873 CCDC42Q96M95 316 aa20.84■□□□□ 0.93
SGCE-207ENST00000447873 DEF6Q9H4E7 631 aa20.84■□□□□ 0.93
SGCE-207ENST00000447873 ACP6Q9NPH0 428 aa20.84■□□□□ 0.93
SGCE-207ENST00000447873 MARCH5Q9NX47 278 aa20.84■□□□□ 0.93
SGCE-207ENST00000447873 DSEQ9UL01 958 aa20.84■□□□□ 0.93
SGCE-207ENST00000447873 SOWAHDA6NJG2 315 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 A8MXQ7 604 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 TLL1O43897 1013 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 LAG3P18627 525 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 GNA15P30679 374 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 KCNT2Q6UVM3 1135 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 UNC93AQ86WB7 457 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 METTL23Q86XA0 190 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 FIBCD1Q8N539 461 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 EPS8L1Q8TE68 723 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 TMEM176AQ96HP8 235 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 TWNKQ96RR1 684 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 NT5C1AQ9BXI3 368 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 DNAI2Q9GZS0 605 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 HMGXB4Q9UGU5 601 aa20.83■□□□□ 0.92
SGCE-207ENST00000447873 TIMM13Q9Y5L4 95 aaPredicted RBP20.83■□□□□ 0.92
SGCE-207ENST00000447873 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.83■□□□□ 0.92
SGCE-207ENST00000447873 SF3B1O75533 1304 aaKnown RBP eCLIP20.82■□□□□ 0.92
SGCE-207ENST00000447873 SSU72P8A0A1W2PR75 194 aa20.82■□□□□ 0.92
SGCE-207ENST00000447873 CARNS1A5YM72 827 aa20.82■□□□□ 0.92
SGCE-207ENST00000447873 ARHGAP6O43182 974 aa20.82■□□□□ 0.92
SGCE-207ENST00000447873 PAEPP09466 180 aa20.82■□□□□ 0.92
SGCE-207ENST00000447873 WARSP23381 471 aaKnown RBP20.82■□□□□ 0.92
SGCE-207ENST00000447873 EIF4A3P38919 411 aaKnown RBP20.82■□□□□ 0.92
SGCE-207ENST00000447873 RAD23BP54727 409 aa20.82■□□□□ 0.92
SGCE-207ENST00000447873 ORC1Q13415 861 aa20.82■□□□□ 0.92
SGCE-207ENST00000447873 SHHQ15465 462 aa20.82■□□□□ 0.92
SGCE-207ENST00000447873 NOP9Q86U38 636 aaKnown RBP20.82■□□□□ 0.92
SGCE-207ENST00000447873 VPS36Q86VN1 386 aa20.82■□□□□ 0.92
SGCE-207ENST00000447873 ZNF558Q96NG5 402 aa20.82■□□□□ 0.92
SGCE-207ENST00000447873 UBE2OQ9C0C9 1292 aaKnown RBP20.82■□□□□ 0.92
SGCE-207ENST00000447873 ELOVL4Q9GZR5 314 aa20.82■□□□□ 0.92
SGCE-207ENST00000447873 PUF60Q9UHX1 559 aaKnown RBP20.82■□□□□ 0.92
SGCE-207ENST00000447873 PCDHB8Q9UN66 801 aa20.82■□□□□ 0.92
SGCE-207ENST00000447873 KIAA1671Q9BY89 1806 aa20.82■□□□□ 0.92
SGCE-207ENST00000447873 AKR1B10O60218 316 aa20.81■□□□□ 0.92
SGCE-207ENST00000447873 CALCAP01258 141 aa20.81■□□□□ 0.92
SGCE-207ENST00000447873 CYP11A1P05108 521 aa20.81■□□□□ 0.92
SGCE-207ENST00000447873 PDGFRBP09619 1106 aa20.81■□□□□ 0.92
SGCE-207ENST00000447873 LHX1P48742 406 aa20.81■□□□□ 0.92
SGCE-207ENST00000447873 ELAVL2Q12926 359 aaKnown RBP20.81■□□□□ 0.92
SGCE-207ENST00000447873 MAPK8IP2Q13387 824 aaPredicted RBP20.81■□□□□ 0.92
SGCE-207ENST00000447873 ZNF571Q7Z3V5 609 aaPredicted RBP20.81■□□□□ 0.92
SGCE-207ENST00000447873 TMEM173Q86WV6 379 aaPredicted RBP20.81■□□□□ 0.92
SGCE-207ENST00000447873 CCDC170Q8IYT3 715 aa20.81■□□□□ 0.92
SGCE-207ENST00000447873 SLC4A11Q8NBS3 891 aa20.81■□□□□ 0.92
SGCE-207ENST00000447873 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.81■□□□□ 0.92
SGCE-207ENST00000447873 AAASQ9NRG9 546 aa20.81■□□□□ 0.92
SGCE-207ENST00000447873 STXBP5LQ9Y2K9 1186 aa20.81■□□□□ 0.92
SGCE-207ENST00000447873 TSC2P49815 1807 aa20.81■□□□□ 0.92
SGCE-207ENST00000447873 H0YGN5 161 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 GABRDO14764 452 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 CD19P15391 556 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 TYMPP19971 482 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 LMO2P25791 158 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 FAM171A1Q5VUB5 890 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 TAF3Q5VWG9 929 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 FUT10Q6P4F1 479 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 OSTM1Q86WC4 334 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 COLGALT1Q8NBJ5 622 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 SPATA18Q8TC71 538 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 SLC20A1Q8WUM9 679 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 IGSF21Q96ID5 467 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 HEXIM2Q96MH2 286 aaKnown RBP20.8■□□□□ 0.92
SGCE-207ENST00000447873 AGPAT1Q99943 283 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 GPR62Q9BZJ7 368 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 DDX43Q9NXZ2 648 aaKnown RBP20.8■□□□□ 0.92
SGCE-207ENST00000447873 NOCTQ9UK39 431 aaKnown RBP20.8■□□□□ 0.92
SGCE-207ENST00000447873 NME7Q9Y5B8 376 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 SYN3O14994 580 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 THAP12O43422 761 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 TNFAIP3P21580 790 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 CYLC1P35663 651 aaPredicted RBP20.8■□□□□ 0.92
SGCE-207ENST00000447873 CDR2Q01850 454 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 MTF1Q14872 753 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 OVOS1Q6IE37 1185 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 RAD9BQ6WBX8 426 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 ACOT1Q86TX2 421 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 ZNF677Q86XU0 584 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 BCL7CQ8WUZ0 217 aaPredicted RBP20.8■□□□□ 0.92
SGCE-207ENST00000447873 SEPT11Q9NVA2 429 aaKnown RBP20.8■□□□□ 0.92
SGCE-207ENST00000447873 ADAMTS1Q9UHI8 967 aa20.8■□□□□ 0.92
SGCE-207ENST00000447873 EPN1Q9Y6I3 576 aaPredicted RBP20.8■□□□□ 0.92
SGCE-207ENST00000447873 HCRTO43612 131 aa20.79■□□□□ 0.92
SGCE-207ENST00000447873 ANXA13P27216 316 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms