RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ZSCAN25Q6NSZ9 544 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 TOGARAM2Q6ZUX3 1019 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 TMC8Q8IU68 726 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 FMNL3Q8IVF7 1028 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 TRIM42Q8IWZ5 723 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 ADGRF4Q8IZF3 695 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 CAMKK1Q8N5S9 505 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 PNPLA1Q8N8W4 532 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 GIMAP8Q8ND71 665 aaPredicted RBP3.72□□□□□ -1.81
PMS1-215ENST00000447232 UBASH3BQ8TF42 649 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 ARHGAP45Q92619 1136 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 MYRFLQ96LU7 910 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 TMEM175Q9BSA9 504 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 PCDH15Q96QU1 1955 aa3.72□□□□□ -1.81
PMS1-215ENST00000447232 HMX2A2RU54 273 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 MEIS3P2A8K0S8 358 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 PDE2AO00408 941 aaPredicted RBP3.71□□□□□ -1.81
PMS1-215ENST00000447232 NRP1O14786 923 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 GPAA1O43292 621 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 OFD1O75665 1012 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 DDHD2O94830 711 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 TGFB1P01137 390 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 GOLGA8HP0CJ92 632 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 PSMC3P17980 439 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 ATP5JP18859 108 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 MAPK8P45983 427 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 SLC5A9Q2M3M2 681 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 TRIM61Q5EBN2 209 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 VITQ6UXI7 678 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 GLRX5Q86SX6 157 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 ING5Q8WYH8 240 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 TNPO1Q92973 898 aaKnown RBP3.71□□□□□ -1.81
PMS1-215ENST00000447232 PMEPA1Q969W9 287 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 UTP4Q969X6 686 aaKnown RBP3.71□□□□□ -1.81
PMS1-215ENST00000447232 MCRS1Q96EZ8 462 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 BOLA2Q9H3K6 86 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 OSGEPQ9NPF4 335 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.71□□□□□ -1.81
PMS1-215ENST00000447232 HCFC1R1Q9NWW0 138 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 RTEL1Q9NZ71 1219 aa3.71□□□□□ -1.81
PMS1-215ENST00000447232 KIAA1522Q9P206 1035 aaPredicted RBP3.71□□□□□ -1.81
PMS1-215ENST00000447232 DNMT3BQ9UBC3 853 aaKnown RBP3.71□□□□□ -1.81
PMS1-215ENST00000447232 MBD1Q9UIS9 605 aaPredicted RBP3.71□□□□□ -1.81
PMS1-215ENST00000447232 SALL3Q9BXA9 1300 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 GOLGA4Q13439 2230 aaKnown RBP3.71□□□□□ -1.82
PMS1-215ENST00000447232 MYBPHLA2RUH7 354 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 ORC4O43929 436 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 PPP1R11O60927 126 aaPredicted RBP3.71□□□□□ -1.82
PMS1-215ENST00000447232 PCSK2P16519 638 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 GDI1P31150 447 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 IL12RB1P42701 662 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 PABPC1LQ4VXU2 614 aaKnown RBP3.71□□□□□ -1.82
PMS1-215ENST00000447232 FAM78AQ5JUQ0 283 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 HGSNATQ68CP4 663 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 SLC23A3Q6PIS1 610 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 GLB1LQ6UWU2 654 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 PLPPR4Q7Z2D5 763 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 SLCO6A1Q86UG4 719 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 ERC1Q8IUD2 1116 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 ZDHHC13Q8IUH4 622 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 APPBP2Q92624 585 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 LPPQ93052 612 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 PPP1R16BQ96T49 567 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 C7orf69Q9H7B7 122 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 C8orf33Q9H7E9 229 aaPredicted RBP3.71□□□□□ -1.82
PMS1-215ENST00000447232 JMJD4Q9H9V9 463 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 ZFP14Q9HCL3 533 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 IL1RAPL2Q9NP60 686 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 CHST12Q9NRB3 414 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 DACT1Q9NYF0 836 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 HSPBP1Q9NZL4 362 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 EBF1Q9UH73 591 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 SOX13Q9UN79 622 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 FAN1Q9Y2M0 1017 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 NCANO14594 1321 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 ZMYM6O95789 1325 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 ADAMTS9Q9P2N4 1935 aa3.71□□□□□ -1.82
PMS1-215ENST00000447232 M0R2C6 588 aa3.7□□□□□ -1.82
PMS1-215ENST00000447232 CCL16O15467 120 aa3.7□□□□□ -1.82
PMS1-215ENST00000447232 RANBP6O60518 1105 aaKnown RBP3.7□□□□□ -1.82
PMS1-215ENST00000447232 APPP05067 770 aa3.7□□□□□ -1.82
PMS1-215ENST00000447232 ALDH2P05091 517 aa3.7□□□□□ -1.82
PMS1-215ENST00000447232 C8AP07357 584 aa3.7□□□□□ -1.82
PMS1-215ENST00000447232 EIF4BP23588 611 aaKnown RBP3.7□□□□□ -1.82
PMS1-215ENST00000447232 SOX9P48436 509 aa3.7□□□□□ -1.82
PMS1-215ENST00000447232 RNASELQ05823 741 aaKnown RBP3.7□□□□□ -1.82
PMS1-215ENST00000447232 RRP12Q5JTH9 1297 aaKnown RBP3.7□□□□□ -1.82
PMS1-215ENST00000447232 PPM1LQ5SGD2 360 aa3.7□□□□□ -1.82
PMS1-215ENST00000447232 PEAR1Q5VY43 1037 aaPredicted RBP3.7□□□□□ -1.82
PMS1-215ENST00000447232 ZNF746Q6NUN9 644 aaPredicted RBP3.7□□□□□ -1.82
PMS1-215ENST00000447232 C11orf74Q86VG3 221 aa3.7□□□□□ -1.82
PMS1-215ENST00000447232 RALGPS2Q86X27 583 aaPredicted RBP3.7□□□□□ -1.82
PMS1-215ENST00000447232 FAM20CQ8IXL6 584 aa3.7□□□□□ -1.82
PMS1-215ENST00000447232 TMEM102Q8N9M5 508 aaPredicted RBP3.7□□□□□ -1.82
PMS1-215ENST00000447232 DEPDC1BQ8WUY9 529 aa3.7□□□□□ -1.82
PMS1-215ENST00000447232 TTC14Q96N46 770 aa3.7□□□□□ -1.82
PMS1-215ENST00000447232 ASB16Q96NS5 453 aa3.7□□□□□ -1.82
PMS1-215ENST00000447232 CAMK1GQ96NX5 476 aa3.7□□□□□ -1.82
PMS1-215ENST00000447232 AMNQ9BXJ7 453 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms