RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 NUB1Q9Y5A7 615 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 SCN9AQ15858 1988 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 TCRBV7S3A2A0A539 114 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 ZBED4O75132 1171 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 ICAM1P05362 532 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 LINGO3P0C6S8 592 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 GNAZP19086 355 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 ALDH3A1P30838 453 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 SKIV2L2P42285 1042 aaKnown RBP15□□□□□ -0.01
ERCC3-203ENST00000445889 CPA2P48052 419 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 GPX6P59796 221 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 PGM5Q15124 567 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 SEPT7Q16181 437 aaKnown RBP15□□□□□ -0.01
ERCC3-203ENST00000445889 NBPF20Q3BBV1 942 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 FNBP1LQ5T0N5 605 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 THEMIS2Q5TEJ8 643 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 LIN9Q5TKA1 542 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 C4orf19Q8IY42 314 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 C10orf82Q8WW14 230 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 IWS1Q96ST2 819 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 MIPEPQ99797 713 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 CYP39A1Q9NYL5 469 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 ZNF70Q9UC06 446 aaPredicted RBP15□□□□□ -0.01
ERCC3-203ENST00000445889 TJP2Q9UDY2 1190 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 ZFP69BQ9UJL9 534 aa15□□□□□ -0.01
ERCC3-203ENST00000445889 DPPA5A6NC42 116 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 CYP1A1P04798 512 aaPredicted RBP14.99□□□□□ -0.01
ERCC3-203ENST00000445889 PTDSS1P48651 473 aaKnown RBP14.99□□□□□ -0.01
ERCC3-203ENST00000445889 GCNT1Q02742 428 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 ZNF252P-AS1Q0IIN9 211 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 DCUN1D2Q6PH85 259 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 RBBP8NLQ8NC74 664 aaPredicted RBP14.99□□□□□ -0.01
ERCC3-203ENST00000445889 TCP10LQ8TDR4 215 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 ZNF483Q8TF39 744 aaPredicted RBP14.99□□□□□ -0.01
ERCC3-203ENST00000445889 ZBTB10Q96DT7 871 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 SLITRK1Q96PX8 696 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 HERC5Q9UII4 1024 aaKnown RBP14.99□□□□□ -0.01
ERCC3-203ENST00000445889 RIPK3Q9Y572 518 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 NEFHP12036 1026 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 CCDC15Q0P6D6 951 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 PDK4Q16654 411 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 ARHGEF16Q5VV41 709 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 ANO7Q6IWH7 933 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 C3orf62Q6ZUJ4 267 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 RHPN2Q8IUC4 686 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 ABRAQ8N0Z2 381 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 FEZF2Q8TBJ5 459 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 AVENQ9NQS1 362 aaPredicted RBP14.99□□□□□ -0.01
ERCC3-203ENST00000445889 ZFATQ9P243 1243 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 WDR64B1ANS9 1081 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 CST3P01034 146 aaPredicted RBP14.99□□□□□ -0.01
ERCC3-203ENST00000445889 ACO1P21399 889 aaKnown RBP14.99□□□□□ -0.01
ERCC3-203ENST00000445889 BRD2P25440 801 aaKnown RBP14.99□□□□□ -0.01
ERCC3-203ENST00000445889 GRIK3Q13003 919 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 TRAF1Q13077 416 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 ORC1Q13415 861 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 DLGAP5Q15398 846 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 MDH1BQ5I0G3 518 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 CDCA2Q69YH5 1023 aaPredicted RBP14.99□□□□□ -0.01
ERCC3-203ENST00000445889 TTC7BQ86TV6 843 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 KATNAL2Q8IYT4 538 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 AGGF1Q8N302 714 aaeCLIP14.99□□□□□ -0.01
ERCC3-203ENST00000445889 TMC2Q8TDI7 906 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 ZNF668Q96K58 619 aaPredicted RBP14.99□□□□□ -0.01
ERCC3-203ENST00000445889 XPNPEP1Q9NQW7 623 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 FEM1BQ9UK73 627 aa14.99□□□□□ -0.01
ERCC3-203ENST00000445889 CORO1CQ9ULV4 474 aaPredicted RBP14.99□□□□□ -0.01
ERCC3-203ENST00000445889 SPDYE2BA6NHP3 402 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 SPDYE5A6NIY4 337 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 SPDYE6P0CI01 402 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 GTF2H1P32780 548 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 HIRAP54198 1017 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-203ENST00000445889 CUL2Q13617 745 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 BBS9Q3SYG4 887 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 GNPTABQ3T906 1256 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 SCARA5Q6ZMJ2 495 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 OGFOD1Q8N543 542 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 EXD1Q8NHP7 514 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 FBXL18Q96ME1 805 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 TARS2Q9BW92 718 aaKnown RBP14.98□□□□□ -0.01
ERCC3-203ENST00000445889 MRIQ9BWK5 157 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 ARMCX1Q9P291 453 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 KANSL3Q9P2N6 904 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 CLUHO75153 1309 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 ZNF831Q5JPB2 1677 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 TTLL13PA6NNM8 815 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 DCTN3O75935 186 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 PTGER2P43116 358 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 CTCFP49711 727 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-203ENST00000445889 BAATQ14032 418 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-203ENST00000445889 NLGN1Q8N2Q7 840 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 SPDYE1Q8NFV5 336 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-203ENST00000445889 ZNF606Q8WXB4 792 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 SENP7Q9BQF6 1050 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 POLR3FQ9H1D9 316 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-203ENST00000445889 TBC1D22BQ9NU19 505 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 ARL8BQ9NVJ2 186 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 HEY2Q9UBP5 337 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 FZD1Q9UP38 647 aa14.98□□□□□ -0.01
ERCC3-203ENST00000445889 ACTL7BQ9Y614 415 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms