RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 ST13P5Q8NFI4 369 aaPredicted RBP20.21■□□□□ 0.83
HDAC4-203ENST00000445704 TMEM174Q8WUU8 243 aa20.21■□□□□ 0.83
HDAC4-203ENST00000445704 RSAD2Q8WXG1 361 aa20.21■□□□□ 0.83
HDAC4-203ENST00000445704 KCNK12Q9HB15 430 aa20.21■□□□□ 0.83
HDAC4-203ENST00000445704 GDAP2Q9NXN4 497 aa20.21■□□□□ 0.83
HDAC4-203ENST00000445704 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.21■□□□□ 0.83
HDAC4-203ENST00000445704 TRAF3IP3Q9Y228 551 aa20.21■□□□□ 0.83
HDAC4-203ENST00000445704 SNX9Q9Y5X1 595 aa20.21■□□□□ 0.83
HDAC4-203ENST00000445704 MYO10Q9HD67 2058 aa20.2■□□□□ 0.82
HDAC4-203ENST00000445704 NRG2O14511 850 aaPredicted RBP20.2■□□□□ 0.82
HDAC4-203ENST00000445704 CST3P01034 146 aaPredicted RBP20.2■□□□□ 0.82
HDAC4-203ENST00000445704 SIGLEC14Q08ET2 396 aa20.2■□□□□ 0.82
HDAC4-203ENST00000445704 SLC39A12Q504Y0 691 aa20.2■□□□□ 0.82
HDAC4-203ENST00000445704 LRRTM3Q86VH5 581 aa20.2■□□□□ 0.82
HDAC4-203ENST00000445704 OSTM1Q86WC4 334 aa20.2■□□□□ 0.82
HDAC4-203ENST00000445704 THEM5Q8N1Q8 247 aa20.2■□□□□ 0.82
HDAC4-203ENST00000445704 GUF1Q8N442 669 aaKnown RBP20.2■□□□□ 0.82
HDAC4-203ENST00000445704 ING5Q8WYH8 240 aa20.2■□□□□ 0.82
HDAC4-203ENST00000445704 ASIC4Q96FT7 647 aa20.2■□□□□ 0.82
HDAC4-203ENST00000445704 CCDC34Q96HJ3 373 aa20.2■□□□□ 0.82
HDAC4-203ENST00000445704 HPDLQ96IR7 371 aa20.2■□□□□ 0.82
HDAC4-203ENST00000445704 CORO1BQ9BR76 489 aa20.2■□□□□ 0.82
HDAC4-203ENST00000445704 CDH7Q9ULB5 785 aa20.2■□□□□ 0.82
HDAC4-203ENST00000445704 SLC27A5Q9Y2P5 690 aa20.2■□□□□ 0.82
HDAC4-203ENST00000445704 TMEM221A6NGB7 291 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 LRRIQ3A6PVS8 624 aaPredicted RBP20.19■□□□□ 0.82
HDAC4-203ENST00000445704 M0R296 226 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 HCRTO43612 131 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 HUS1O60921 280 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 PRPF40AO75400 957 aaKnown RBP20.19■□□□□ 0.82
HDAC4-203ENST00000445704 SOAT2O75908 522 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 PTPN2P17706 415 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 SOWAHAQ2M3V2 549 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 POTEHQ6S545 545 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 HFE2Q6ZVN8 426 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 HS6ST3Q8IZP7 471 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 PARD3BQ8TEW8 1205 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 FGF13Q92913 245 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 TIGD1Q96MW7 591 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 DNAJC25Q9H1X3 360 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 CHMP5Q9NZZ3 219 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 RAPGEFL1Q9UHV5 662 aa20.19■□□□□ 0.82
HDAC4-203ENST00000445704 CALUO43852 315 aaPredicted RBP20.18■□□□□ 0.82
HDAC4-203ENST00000445704 KIF20AO95235 890 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 ACAT1P24752 427 aaKnown RBP20.18■□□□□ 0.82
HDAC4-203ENST00000445704 CCR2P41597 374 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 DLG4P78352 724 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 ZCWPW2Q504Y3 356 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 PRSS36Q5K4E3 855 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 LIMS2Q7Z4I7 341 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 NPAS3Q8IXF0 933 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 ADGRF2Q8IZF7 708 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 TOP6BLQ8N6T0 577 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 SPATA20Q8TB22 786 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 TCEAL4Q96EI5 215 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 AVENQ9NQS1 362 aaPredicted RBP20.18■□□□□ 0.82
HDAC4-203ENST00000445704 TMLHEQ9NVH6 421 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 IGSF9Q9P2J2 1179 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 MRPS23Q9Y3D9 190 aaKnown RBP20.18■□□□□ 0.82
HDAC4-203ENST00000445704 PCDHA5Q9Y5H7 936 aa20.18■□□□□ 0.82
HDAC4-203ENST00000445704 ANHXE9PGG2 379 aa20.17■□□□□ 0.82
HDAC4-203ENST00000445704 CEBPBP17676 345 aa20.17■□□□□ 0.82
HDAC4-203ENST00000445704 COL9A1P20849 921 aa20.17■□□□□ 0.82
HDAC4-203ENST00000445704 ANP32AP39687 249 aaKnown RBP20.17■□□□□ 0.82
HDAC4-203ENST00000445704 MYO1EQ12965 1108 aa20.17■□□□□ 0.82
HDAC4-203ENST00000445704 TDGQ13569 410 aa20.17■□□□□ 0.82
HDAC4-203ENST00000445704 HTR4Q13639 388 aa20.17■□□□□ 0.82
HDAC4-203ENST00000445704 NFIL3Q16649 462 aa20.17■□□□□ 0.82
HDAC4-203ENST00000445704 CCDC142Q17RM4 750 aa20.17■□□□□ 0.82
HDAC4-203ENST00000445704 CEP135Q66GS9 1140 aa20.17■□□□□ 0.82
HDAC4-203ENST00000445704 UBALD2Q8IYN6 164 aa20.17■□□□□ 0.82
HDAC4-203ENST00000445704 TMEM86AQ8N2M4 240 aa20.17■□□□□ 0.82
HDAC4-203ENST00000445704 KBTBD7Q8WVZ9 684 aa20.17■□□□□ 0.82
HDAC4-203ENST00000445704 DDX43Q9NXZ2 648 aaKnown RBP20.17■□□□□ 0.82
HDAC4-203ENST00000445704 R3HCC1Q9Y3T6 440 aaKnown RBP20.17■□□□□ 0.82
HDAC4-203ENST00000445704 ZFP37Q9Y6Q3 630 aaPredicted RBP20.17■□□□□ 0.82
HDAC4-203ENST00000445704 GABRDO14764 452 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 NARSO43776 548 aaKnown RBP20.16■□□□□ 0.82
HDAC4-203ENST00000445704 NR2F2P24468 414 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 CLDN10P78369 228 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 C1orf220Q5T0J3 134 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 TDRD10Q5VZ19 366 aaKnown RBP20.16■□□□□ 0.82
HDAC4-203ENST00000445704 PARM1Q6UWI2 310 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 ELMOD1Q8N336 334 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 FGF14Q92915 247 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 ZNF512Q96ME7 567 aaPredicted RBP20.16■□□□□ 0.82
HDAC4-203ENST00000445704 GSDMAQ96QA5 445 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 PKMYT1Q99640 499 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 RPP25Q9BUL9 199 aaKnown RBP20.16■□□□□ 0.82
HDAC4-203ENST00000445704 LRRC3Q9BY71 257 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 RMND1Q9NWS8 449 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 HSFX1Q9UBD0 423 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 DUSP12Q9UNI6 340 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 NUMBLQ9Y6R0 609 aa20.16■□□□□ 0.82
HDAC4-203ENST00000445704 MOSPD3O75425 235 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 AKAP3O75969 853 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 PDGFBP01127 241 aaPredicted RBP20.15■□□□□ 0.82
HDAC4-203ENST00000445704 C4BPAP04003 597 aaKnown RBP20.15■□□□□ 0.82
HDAC4-203ENST00000445704 ATF6P18850 670 aa20.15■□□□□ 0.82
HDAC4-203ENST00000445704 PRCPP42785 496 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms