RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 P4HA2O15460 535 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 AP5Z1O43299 807 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 KLK7P49862 253 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 LILRA4P59901 499 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 APBA1Q02410 837 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 EXOC3L4Q17RC7 722 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 SGSM1Q2NKQ1 1148 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 SCARA5Q6ZMJ2 495 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 LRRC52Q8N7C0 313 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 EHBP1Q8NDI1 1231 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 TCF25Q9BQ70 676 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 LSM14BQ9BX40 385 aaKnown RBP18.47■□□□□ 0.55
LIME1-202ENST00000444951 TRIM5Q9C035 493 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 MARCH5Q9NX47 278 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 CDH22Q9UJ99 828 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 ADAM28Q9UKQ2 775 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 POLIQ9UNA4 740 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 LZTS1Q9Y250 596 aa18.47■□□□□ 0.55
LIME1-202ENST00000444951 KPNA7A9QM74 516 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 ATICP31939 592 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 PNPLA4P41247 253 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 TNNC1P63316 161 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 NOP14P78316 857 aaKnown RBP18.46■□□□□ 0.55
LIME1-202ENST00000444951 SYCP1Q15431 976 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 UVSSAQ2YD98 709 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 WDR72Q3MJ13 1102 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 ZNF667Q5HYK9 610 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 LLGL2Q6P1M3 1020 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 CD300LGQ6UXG3 332 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 SLC39A11Q8N1S5 342 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 SUSD6Q92537 303 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 TATDN2Q93075 761 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 TMEM169Q96HH4 297 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 IGSF21Q96ID5 467 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 MMS19Q96T76 1030 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 APOL5Q9BWW9 433 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 XYLT2Q9H1B5 865 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 ENTPD7Q9NQZ7 604 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 COQ4Q9Y3A0 265 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 SNX9Q9Y5X1 595 aa18.46■□□□□ 0.55
LIME1-202ENST00000444951 PIEZO1Q92508 2521 aa18.45■□□□□ 0.54
LIME1-202ENST00000444951 PMM2O15305 246 aa18.45■□□□□ 0.54
LIME1-202ENST00000444951 CBFA2T2O43439 604 aa18.45■□□□□ 0.54
LIME1-202ENST00000444951 ASS1P00966 412 aaKnown RBP18.45■□□□□ 0.54
LIME1-202ENST00000444951 PON1P27169 355 aa18.45■□□□□ 0.54
LIME1-202ENST00000444951 KCNMA1Q12791 1236 aa18.45■□□□□ 0.54
LIME1-202ENST00000444951 CBX2Q14781 532 aaPredicted RBP18.45■□□□□ 0.54
LIME1-202ENST00000444951 NR1I3Q14994 352 aa18.45■□□□□ 0.54
LIME1-202ENST00000444951 SYCE2Q6PIF2 218 aa18.45■□□□□ 0.54
LIME1-202ENST00000444951 B3GALT6Q96L58 329 aa18.45■□□□□ 0.54
LIME1-202ENST00000444951 SENP8Q96LD8 212 aa18.45■□□□□ 0.54
LIME1-202ENST00000444951 CDCA3Q99618 268 aaPredicted RBP18.45■□□□□ 0.54
LIME1-202ENST00000444951 S1PR5Q9H228 398 aa18.45■□□□□ 0.54
LIME1-202ENST00000444951 APOBEC3GQ9HC16 384 aaKnown RBP18.45■□□□□ 0.54
LIME1-202ENST00000444951 TIMM13Q9Y5L4 95 aaPredicted RBP18.45■□□□□ 0.54
LIME1-202ENST00000444951 SCN1AP35498 2009 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 GTPBP10A4D1E9 387 aaKnown RBP18.44■□□□□ 0.54
LIME1-202ENST00000444951 CYB561D2O14569 222 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 TPM3P06753 285 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 PPM1AP35813 382 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 RAP1GAPP47736 663 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 PDE12Q6L8Q7 609 aaKnown RBP18.44■□□□□ 0.54
LIME1-202ENST00000444951 ANKRD54Q6NXT1 300 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 FUT10Q6P4F1 479 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 GJB7Q6PEY0 223 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 TRIM65Q6PJ69 517 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 RRAGAQ7L523 313 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 CEP57Q86XR8 500 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 ARHGEF19Q8IW93 802 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 LMO3Q8TAP4 145 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 TAF4BQ92750 862 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 RPGRIP1Q96KN7 1286 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 NT5C1BQ96P26 610 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 PHF7Q9BWX1 381 aaPredicted RBP18.44■□□□□ 0.54
LIME1-202ENST00000444951 GPR62Q9BZJ7 368 aa18.44■□□□□ 0.54
LIME1-202ENST00000444951 FAM207AQ9NSI2 230 aaPredicted RBP18.44■□□□□ 0.54
LIME1-202ENST00000444951 TMEM189-UBE2V1I3L0A0 370 aa18.43■□□□□ 0.54
LIME1-202ENST00000444951 TRAPPC3O43617 180 aa18.43■□□□□ 0.54
LIME1-202ENST00000444951 CA8P35219 290 aa18.43■□□□□ 0.54
LIME1-202ENST00000444951 KRT17Q04695 432 aa18.43■□□□□ 0.54
LIME1-202ENST00000444951 FAM171A1Q5VUB5 890 aa18.43■□□□□ 0.54
LIME1-202ENST00000444951 SARM1Q6SZW1 724 aa18.43■□□□□ 0.54
LIME1-202ENST00000444951 TMEM184AQ6ZMB5 413 aa18.43■□□□□ 0.54
LIME1-202ENST00000444951 TAS1R1Q7RTX1 841 aa18.43■□□□□ 0.54
LIME1-202ENST00000444951 PPM1KQ8N3J5 372 aa18.43■□□□□ 0.54
LIME1-202ENST00000444951 EDAQ92838 391 aa18.43■□□□□ 0.54
LIME1-202ENST00000444951 SMYD3Q9H7B4 428 aa18.43■□□□□ 0.54
LIME1-202ENST00000444951 GRPEL1Q9HAV7 217 aa18.43■□□□□ 0.54
LIME1-202ENST00000444951 PUF60Q9UHX1 559 aaKnown RBP18.43■□□□□ 0.54
LIME1-202ENST00000444951 SF3B1O75533 1304 aaKnown RBP eCLIP18.43■□□□□ 0.54
LIME1-202ENST00000444951 HUS1O60921 280 aa18.42■□□□□ 0.54
LIME1-202ENST00000444951 STAU1O95793 577 aaKnown RBP18.42■□□□□ 0.54
LIME1-202ENST00000444951 WEE2P0C1S8 567 aa18.42■□□□□ 0.54
LIME1-202ENST00000444951 ODC1P11926 461 aa18.42■□□□□ 0.54
LIME1-202ENST00000444951 P4HA1P13674 534 aa18.42■□□□□ 0.54
LIME1-202ENST00000444951 TKTP29401 623 aaKnown RBP18.42■□□□□ 0.54
LIME1-202ENST00000444951 CDH8P55286 799 aa18.42■□□□□ 0.54
LIME1-202ENST00000444951 GSE1Q14687 1217 aa18.42■□□□□ 0.54
LIME1-202ENST00000444951 PHLDB3Q6NSJ2 640 aa18.42■□□□□ 0.54
LIME1-202ENST00000444951 TMC7Q7Z402 723 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms