RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 CPT1AP50416 773 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 LRRC14Q15048 493 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 P3H1Q32P28 736 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 PRRT2Q7Z6L0 340 aaPredicted RBP11.18□□□□□ -0.62
CALD1-210ENST00000443197 ANKMY2Q8IV38 441 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 SRRM1Q8IYB3 904 aaKnown RBP11.18□□□□□ -0.62
CALD1-210ENST00000443197 PDIK1LQ8N165 341 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 HASPINQ8TF76 798 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 FAF2Q96CS3 445 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 SIK2Q9H0K1 926 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 ISCUQ9H1K1 167 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 DHX33Q9H6R0 707 aaKnown RBP11.18□□□□□ -0.62
CALD1-210ENST00000443197 COMMD10Q9Y6G5 202 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 UMODL1Q5DID0 1318 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 RPTORQ8N122 1335 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 A0A0A6YYK5 440 aaPredicted RBP11.18□□□□□ -0.62
CALD1-210ENST00000443197 C17orf102A2RUQ5 167 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 RGS20O76081 388 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 PGK1P00558 417 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 PHBP35232 272 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 IFT88Q13099 833 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 KYNUQ16719 465 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 RWDD4Q6NW29 188 aaKnown RBP11.18□□□□□ -0.62
CALD1-210ENST00000443197 ZBED8Q8IZ13 594 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 ACTRT1Q8TDG2 376 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 ARL8AQ96BM9 186 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 TSNARE1Q96NA8 513 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 ACO2Q99798 780 aaKnown RBP11.18□□□□□ -0.62
CALD1-210ENST00000443197 CDT1Q9H211 546 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 SIX2Q9NPC8 291 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 ARHGAP28Q9P2N2 729 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 ZNF112Q9UJU3 913 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 LRFN2Q9ULH4 789 aa11.18□□□□□ -0.62
CALD1-210ENST00000443197 EZRP15311 586 aaKnown RBP11.17□□□□□ -0.62
CALD1-210ENST00000443197 GNL1P36915 607 aaPredicted RBP11.17□□□□□ -0.62
CALD1-210ENST00000443197 COILP38432 576 aaPredicted RBP11.17□□□□□ -0.62
CALD1-210ENST00000443197 CACNB2Q08289 660 aaPredicted RBP11.17□□□□□ -0.62
CALD1-210ENST00000443197 ATP13A4Q4VNC1 1196 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 CXCL17Q6UXB2 119 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 CFAP36Q96G28 342 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 MAFBQ9Y5Q3 323 aaPredicted RBP11.17□□□□□ -0.62
CALD1-210ENST00000443197 HMGB1P1B2RPK0 211 aaPredicted RBP11.17□□□□□ -0.62
CALD1-210ENST00000443197 LIG3P49916 1009 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 PTPN11Q06124 597 aaPredicted RBP11.17□□□□□ -0.62
CALD1-210ENST00000443197 ARHGEF18Q6ZSZ5 1173 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 DNAAF3Q8N9W5 541 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 ZNF560Q96MR9 790 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 GPATCH2LQ9NWQ4 482 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 RAB21Q9UL25 225 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 A0A0B4J269 797 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 A6NNZ2 444 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 YY1P25490 414 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 NDST1P52848 882 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 PDIA2Q13087 525 aaKnown RBP11.17□□□□□ -0.62
CALD1-210ENST00000443197 SLC29A2Q14542 456 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 LONRF1Q17RB8 773 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 TUBB8Q3ZCM7 444 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 SNF8Q96H20 258 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 KATNAL1Q9BW62 490 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 SMYD3Q9H7B4 428 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 A0A1B0GUL6 1792 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 ACAT1P24752 427 aaKnown RBP11.17□□□□□ -0.62
CALD1-210ENST00000443197 HSD17B3P37058 310 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 EIF3EP60228 445 aaKnown RBP11.17□□□□□ -0.62
CALD1-210ENST00000443197 BYSLQ13895 437 aaKnown RBP11.17□□□□□ -0.62
CALD1-210ENST00000443197 TFDP2Q14188 446 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 PIGHQ14442 188 aaPredicted RBP11.17□□□□□ -0.62
CALD1-210ENST00000443197 CENPUQ71F23 418 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 ALG3Q92685 438 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 ZBED3Q96IU2 234 aaPredicted RBP11.17□□□□□ -0.62
CALD1-210ENST00000443197 MFSD14AQ96MC6 490 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 TMEM134Q9H6X4 195 aa11.17□□□□□ -0.62
CALD1-210ENST00000443197 LTBP3Q9NS15 1303 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 ZMYM2Q9UBW7 1377 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 F8VP50 259 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 INHBAP08476 426 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 GKAP1Q5VSY0 366 aaPredicted RBP11.16□□□□□ -0.62
CALD1-210ENST00000443197 RCOR2Q8IZ40 523 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 CACNA2D3Q8IZS8 1091 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 TMEM176AQ96HP8 235 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 TNIP3Q96KP6 325 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 ATP6V1G3Q96LB4 118 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 NMRK2Q9NPI5 230 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 B3GAT3O94766 335 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 MOCS2O96007 188 aaPredicted RBP11.16□□□□□ -0.62
CALD1-210ENST00000443197 PSMC4P43686 418 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 NUMBP49757 651 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 ITGA8P53708 1063 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 EIF3BP55884 814 aaKnown RBP11.16□□□□□ -0.62
CALD1-210ENST00000443197 DCAF6Q58WW2 860 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 NOL9Q5SY16 702 aaKnown RBP11.16□□□□□ -0.62
CALD1-210ENST00000443197 PLPPR4Q7Z2D5 763 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 PLEKHO2Q8TD55 490 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 PROSCO94903 275 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 ARF4P18085 180 aaPredicted RBP11.16□□□□□ -0.62
CALD1-210ENST00000443197 PTENP60484 403 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 RPL7AP62424 266 aaKnown RBP11.16□□□□□ -0.62
CALD1-210ENST00000443197 KYAT1Q16773 422 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 TMEM63BQ5T3F8 832 aa11.16□□□□□ -0.62
CALD1-210ENST00000443197 C6orf118Q5T5N4 469 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms